Gene Patl_0165 details

Gene Information

• Locus tag: Patl_0165
• ID: 4174029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 196451
• End bp: 197257
• Gene Length: 807 bp
• Protein Length: 268 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053164
• Product: hypothetical protein
• Protein accession: YP_659751
• Protein GI: 109896496

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.638548
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATACTA ACGTGAATAC ATTATTTGAA AAGCTGTGGG AAAGTTACCT CGCTGTTACC 
CCTTCAGCGG TTACCGTTCA TGACTTGTTT GGCAAAACGC AAGGGCAAGA AGTGATCAAC 
GATCACATCG CATTACGTAC TTTCAACTTA CCTGGTATTG GACTTGACGC GCTGGCGGCA 
CATTTTGAGG CGTTGGGTTA CAAGGCCTGT GGTGAATACC ATTTCGTAGG CAAAAAGCTG 
TACGCTAAAC ATTTTGAGCA CTCAGAAAAT CCAGACTTAC CCAAAGTCTT TATTTCAGAG 
CTTTTACTTG AGCAGTGCAG CGAATCACTG CAGCAAACCA TTCGAAATCT TGTTTCGAAT 
ATGAGCGTTG ATGCAGTGAC ACAAGATAAC TTTTTATATT CTGGGCGTCA TTGGGACATT 
GATTACGCGA CCTATCAGCA GTTATTGCAA GAATCCGAGT TTGCGGCTTG GGTCGCTGCG 
TGGGGCTACC GAGCGAATCA TTTCACTGTA AGCAATAACC ATCTCAGCGA ATTTGATTCT 
ATCGAACAAA TCAATCAAGC AGTGAAAGCG GCAGGTCTTT CCTTGAATAC TGCAGGCGGC 
GAAATAAAAG GTTCGGTTGA GGTCATGCTA GAGCAATCAT CTACCCTGGC AGATAAGCAC 
CCCGTGGCGT TTAGTGATGG GGAGCGAGAG ATTCCTAGCT GCTTCTACGA GTTCGCTAAA 
CGTTATCCTA AGCCTGACGG CAAATTATTT ACTGGGTTTG TGGCTGAATC AGCAGATAAA 
ATCTTCGAAA GTACTAACGC AAGATAA 

 

Protein sequence

MHTNVNTLFE KLWESYLAVT PSAVTVHDLF GKTQGQEVIN DHIALRTFNL PGIGLDALAA 
HFEALGYKAC GEYHFVGKKL YAKHFEHSEN PDLPKVFISE LLLEQCSESL QQTIRNLVSN 
MSVDAVTQDN FLYSGRHWDI DYATYQQLLQ ESEFAAWVAA WGYRANHFTV SNNHLSEFDS 
IEQINQAVKA AGLSLNTAGG EIKGSVEVML EQSSTLADKH PVAFSDGERE IPSCFYEFAK 
RYPKPDGKLF TGFVAESADK IFESTNAR