| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0158 |
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| Symbol | |
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| ID | 4172645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 190218 |
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| End bp | 190838 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053157 |
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| Product | redoxin |
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| Protein accession | YP_659744 |
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| Protein GI | 109896489 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | [TIGR02661] methylamine dehydrogenase accessory protein MauD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.913611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAACT TATTCTTATT CACTTTCGCC CTGCTATGGG TACTGGTTAT CGCACTTGGT
GTCGTAGTTT ACGCCCTAGC ACGTCAGGTC GGTGTGCTGT ACGAACGCGT GGCTCCTGCG
GGCGCCCTAG CTATGAATCA ACAACTTAAA GCCGGGGATA AAGCCCCTGA AATTTCAGTC
AAAACCATCA CCAATCAGAA ATTGTTTATC GGCAAGCCGA CTAAGAAGAG CACCTTACTG
TTCTTTTTAT CCCCGGATTG CCCAGTATGT AAAGAGTACC TACCTGTCAT TATCTCCCTA
TCCCATGCCG AGCGTTCGCA TTTAGACGTG GTATTTGTAA GCGATGGTGA TGAACCAGAT
CATCAGGCTT TTATCAAAGA GAAAAAACTC GAAAACTTCC CTTATGTGCT CTCAGAAGAG
GTGGGTAAAA AATACGGTGT GAGCCGCTTA CCTTACGCCA CCCTTATCGA CAAGAGCGGC
ATTATCTCTT CAATGGGCTT GGTCAATTCT CGCGAACACA TCGAAAGCCT GCTCAATGCC
CAAGACCTCA ATGTTGCATC GATTCAAGAG TTCCTAGAGA AACAAGGAAA CAACGAACGC
ACCCTTTATA AACAGGCTTA A
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| Protein sequence | MSNLFLFTFA LLWVLVIALG VVVYALARQV GVLYERVAPA GALAMNQQLK AGDKAPEISV
KTITNQKLFI GKPTKKSTLL FFLSPDCPVC KEYLPVIISL SHAERSHLDV VFVSDGDEPD
HQAFIKEKKL ENFPYVLSEE VGKKYGVSRL PYATLIDKSG IISSMGLVNS REHIESLLNA
QDLNVASIQE FLEKQGNNER TLYKQA
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