| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0120 |
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| Symbol | |
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| ID | 4171802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 138266 |
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| End bp | 140584 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053119 |
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| Product | putative alpha-1,2-mannosidase |
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| Protein accession | YP_659706 |
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| Protein GI | 109896451 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.147573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTACA AGCTTATTTT TACCATTCCT GGCTTACTGT TATTGGCCTC ATGCGGCATG
ACAACAGAAC CCAAGGAGGC TGTTGCAACC GCACCTTCGG TTGATTTGGT TGATTATGTT
AATCCGCTTA TGGGTACGGA TTCCAAGTTC AGTTTATCAA ATGGCAATAC TTATCCAGCG
ATAGCCACGC CATGGGCAAT GAATTTCTGG ACACCGATGA CTGCCCCCAT CGGCGATGGC
TGGACGTATA AATACAACGA CGATCAAATT CGCGGTATTA AGCAAACACA CCAACCCAGC
CCTTGGCTAA ACGACTATGG TGCATTTTCT TTAATGGCGG TGACAGGCGA AATGAAATTT
AACCAAGATG ATCGTGCGTC TTGGTACTCC CACAAGGCAG AACAAGCCAG TCCTGATTAC
TACAGTGTGT ATTTAGCCTC TTACGATGTC ACCGCTGAGG TAACGCCTAC CGAACGCGCT
GCGCAGTTTC GCTTTACTTT TCCTGATACC GACAATGCCT TCATTATCTT AGATGCATTC
GACAAAGGCT CTATGGTGAA AATCATCCCA GAAGAGCGAA AAATAGTCGG TTATGCGCGC
AATAATCACG GTGGTGTGCC GGACAACTTC CATAATTATT TTGTGGCAGA ATTTGATAAA
GACTTTGAAA TCAGCCGTAC TTGGACTGAC GAATACCAAT TAAACGCAGA TGCTATTCAA
AGCAAAGGCG AGCACGTAGG TGCCGTTATC GGTTTTAAAA CCAAGCGCGG TGAAACGGTA
TCAGTGAAAA TTGCCTCGTC ATTTATTAGC CCTGAACAAG CACAGCTCAA TTTAGACCGA
GAAATCGGCC AAGACACCTT CGACACCACC CGTGAAAAAG CCCATAAGTA TTGGCAGGAC
GAGCTGTCAC GCATTGAAAT AGTCGACGAC AACAAAGACA ACCTACGCAC GTTTTACTCT
GCGCTTTACC GCGTCTTATT ATTCCCGCGT AAGTTTTACG AGTACAACCA AGCGGGTGAA
GTCGTGCATT ACAGCCCTTA CAACGGTGAA GTGCTGCCCG GCTACATGTT TACCGACAAT
GGCTTTTGGG ACACTTTCCG CGCGGTATTC CCCTTCTTTA CCCTAATGTA CCCAGAGCTC
GACGCACAAA TAATGGAAGG CTTAGCCAAT ACCTACAAAG AATCCGGTTG GTTGCCTGAA
TGGGCTAGCC CAGGCCATCG CGGGGTAATG ATTGGCTCTA ACTCCGCAGT GAATATTGCT
GATGCCTACC TCAAGGGTAT CACCGATATC GACATCGATA CGCTTTACGA AGCCATAGTC
AAAAATGCTC AAGTCGATGA AGGTCGCCCG GTTAGCTCAG TCGGTAGAGA AGGCGTCGAT
TATTATAACG AGTTAGGTTA TGTGCCTTAC GACGTTGGTA TTCACGAAAA CGCAGCACGT
ACCCTTGAAT ACGCCTTTGC CGATTTCAAT ATTTATCGCC TCGCTGAGCG CTTAGGTAAA
ACCGACGATG CTGCCAAGTA CAAGCAAAGA GCGATGAATT ACAAACACTT GTTTGATAAA
GAAAGTGGAT GGATGCGCGG TAAAAACGAA GACGGCAGTT TTCAAACCCC GTTTAACCCT
TTGAAGTGGG GTGATGCATT CACCGAAGGC AATAGCCTGC ACTACACCTG GTCTGTGTTT
CATGATATCT CAGGTTTGAA AGACATGATG GGGGGCGATC AAGCCTTCGT GAATAAACTT
GATAGCGTGT TCAGCATGCC ACCTACCTTC GACGACTCTT ATTATGGCTT TACCATTCAT
GAAATTCGCG AAATGCAGAT CGTGAACATG GGCAACTATG CCCACGGTAA CCAGCCTATT
CAGCATATGA GTTATTTGTA CAACTACGCT GGCCAGCCGT GGAAAACCCA ATATCACGTG
CGCAACATCA TGGATAAGCT TTACTCAGCC ACGCCTGATG GCTACTGCGG CGATGAAGAC
AACGGTCAAA CGTCCGCTTG GTACGTGTTC AGCGCCCTTG GTTTTTACCC TGTAGCGCCC
GGTAGCGATG AGTACGTGTT AGGTAGCCCA CTGTTCGACA AAGCCACGTT GCATTTACAA
AACGGTGAAC GCTTTACCGT CAAAGGCAAT AACAACAGCA AAGACAACGT CTATGTGAAT
AGCGCCAAAC TAAATGGCAA GACTTTCGAT AAGACCTTCT TGTCTCATCA GCAAATTCAG
CAAGGCGGTG AAATATCTTT TGATATGACC AACCAACCAA ACAAGTCATG GGCCACCAGC
AAAGAAGCCG TGCCCTATTC AATGTCGACC GCCGACTAA
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| Protein sequence | MNYKLIFTIP GLLLLASCGM TTEPKEAVAT APSVDLVDYV NPLMGTDSKF SLSNGNTYPA
IATPWAMNFW TPMTAPIGDG WTYKYNDDQI RGIKQTHQPS PWLNDYGAFS LMAVTGEMKF
NQDDRASWYS HKAEQASPDY YSVYLASYDV TAEVTPTERA AQFRFTFPDT DNAFIILDAF
DKGSMVKIIP EERKIVGYAR NNHGGVPDNF HNYFVAEFDK DFEISRTWTD EYQLNADAIQ
SKGEHVGAVI GFKTKRGETV SVKIASSFIS PEQAQLNLDR EIGQDTFDTT REKAHKYWQD
ELSRIEIVDD NKDNLRTFYS ALYRVLLFPR KFYEYNQAGE VVHYSPYNGE VLPGYMFTDN
GFWDTFRAVF PFFTLMYPEL DAQIMEGLAN TYKESGWLPE WASPGHRGVM IGSNSAVNIA
DAYLKGITDI DIDTLYEAIV KNAQVDEGRP VSSVGREGVD YYNELGYVPY DVGIHENAAR
TLEYAFADFN IYRLAERLGK TDDAAKYKQR AMNYKHLFDK ESGWMRGKNE DGSFQTPFNP
LKWGDAFTEG NSLHYTWSVF HDISGLKDMM GGDQAFVNKL DSVFSMPPTF DDSYYGFTIH
EIREMQIVNM GNYAHGNQPI QHMSYLYNYA GQPWKTQYHV RNIMDKLYSA TPDGYCGDED
NGQTSAWYVF SALGFYPVAP GSDEYVLGSP LFDKATLHLQ NGERFTVKGN NNSKDNVYVN
SAKLNGKTFD KTFLSHQQIQ QGGEISFDMT NQPNKSWATS KEAVPYSMST AD
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