| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0103 |
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| Symbol | |
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| ID | 4172875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 116399 |
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| End bp | 117769 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053102 |
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| Product | VWA containing CoxE-like |
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| Protein accession | YP_659689 |
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| Protein GI | 109896434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTTTA TCGCTGATTT TATTGGTGCA CTGCGTGAAG CGGGTTTGCC TATATCCCCG
GCCGAATCGT TAGATGCGAT AAAGGCGATT GGGCTGTTGG GGCTTGGGTC GCGAGCAACA
GCCAAATCCG TATTGGCGCT CACGCTAGTG AAGCGCCAGC AAGACCAAGC CACGTACCAC
GAATTGTTTG AGTTGTATTT TGCTAATATC GAAAATGAGA AAGACGGCGA CGACGGTACG
CTTGAATCGC CAGCAGCGAC AGACAAGCAG CAAAAACAAA ATCGAGAAAA CGCTGAGGCA
AAAGGCGGGT CGGTAGCCAC TGCTAGCTCT GCATTAGGAC AGTTTCTCGC ACAACAACAA
GATATGGCGT TAGCCATTGC ACAAGCGGCG AAAGCCGAAG ATCTATCTTC TATTGTTTTC
TTTACTCAAA AGAATCACTT CGCTTACAAA ATAATGCAAC GCCTTGGGGG GGATGAATTA
AGCGCTGAAC TTCGCGCTAC GCCAGATAGC CCAGAACAAA AAAGACTGCA AGATCAACTA
ACACAGGCCC GTGCACGTTT GCTTGAGCAA GTGAAAGACT ATGTAGAGCA GCAATACCTT
ATTTTCGCTC GGCACAAGGG GGCGAAGTTT CGTGAAGATC ACCTACAGCA AGCAAAATTA
AGCCAACTTG AGCATACCGA TTACGCACTA ATGCAGCGCT TAGTGCAAAA GGCGGCGCGC
AAACTAGCCA CCCAGCACAG CCGTAGGCGC CTAACACGTA AGCGCGGGCA ATTGGATGTT
CGTAAAACCA TTGCGGCAAA TGCAGCGTTT GATGGTGCCT TGTTTCACAC TCGCTGGAAG
GCAACGCGCG TAGAGCGACC TAAAATCATG GTGATTTGTG ACGTCAGTGG TTCAGTGAGT
CGCGTGGCGC GTTTCTTGTT ATTGTTTTTG TATTCACTGC AAGACGTTAT CCCCAAAGTA
CGCTCGTTCG TGTTTGCCTC AGATATGATT GAAGTCACCA CGCTATTACA ACAAGAAGAC
ATAGAATCTG CACTGGAAAA AATTATGCAA CGTTGGGGCG GCCTGTCGAC CGATTATGGC
AAGGCGCTGG CAGGCTTTCA GGATCAAGCC CTAACCAGTA TCGATAAAAA AACCACGGTT
ATTTTGCTCG GAGATGCACG CAATAACGAC GGGGATGGGC GCACCGACAT TTGGCAAAAA
GTGTATCGCC AAAGTAAACG GGTGCTGTGG CTAAACCCAG AGCAACACAA CAGCTGGGAC
ACGGGCGATT CAATCATGTC TGAGTATTCG CCTTGGTGTA GTAGCGTTGA GCCATGCCGT
AACCTGAAAG ACATTGAAGG TATATTTGGC CGAATTTTAA AGTATTCGTA A
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| Protein sequence | MRFIADFIGA LREAGLPISP AESLDAIKAI GLLGLGSRAT AKSVLALTLV KRQQDQATYH
ELFELYFANI ENEKDGDDGT LESPAATDKQ QKQNRENAEA KGGSVATASS ALGQFLAQQQ
DMALAIAQAA KAEDLSSIVF FTQKNHFAYK IMQRLGGDEL SAELRATPDS PEQKRLQDQL
TQARARLLEQ VKDYVEQQYL IFARHKGAKF REDHLQQAKL SQLEHTDYAL MQRLVQKAAR
KLATQHSRRR LTRKRGQLDV RKTIAANAAF DGALFHTRWK ATRVERPKIM VICDVSGSVS
RVARFLLLFL YSLQDVIPKV RSFVFASDMI EVTTLLQQED IESALEKIMQ RWGGLSTDYG
KALAGFQDQA LTSIDKKTTV ILLGDARNND GDGRTDIWQK VYRQSKRVLW LNPEQHNSWD
TGDSIMSEYS PWCSSVEPCR NLKDIEGIFG RILKYS
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