Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0054 |
Symbol | |
ID | 4171888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 63548 |
End bp | 64951 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638053052 |
Product | hypothetical protein |
Protein accession | YP_659640 |
Protein GI | 109896385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.2662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGTT ATTGGGTAAT CGGCTTTTTG CTAGTCGCGT CACAAGGATG GGCGAAAGGA CTTTCCCCCT ACCTTCCGCT ACAAATTTCA CCTGAAATTG AATCTCAGAT AGAAAAAGTC ATGGCACTGA CCCCTGGGGC ACCCCTTACC AAGCCGTACA AAGCGGTTGA TATTATGCGC CGCAACAAAC TTATTGCCAC ACGATTTCCT GAGCTTCACC GCTCGGTTGA CGCTTATTTA GCCCGGTTTA AAGATACGTT AGCGTTAACC CATGTGAGCG CATCAATATC GGCAGGTGAC GATGAAAGCA GCCCTGTGCC GAATCAAAGA GGTATTAAAC GCGACTCCAG CTACCAAATC TCGGCTTCTG GCGTGGCTTT TATCTCACCT TATGCCTATG TGGCAGGCGG TGCCTTGTAT GCTGATGGCG AAGATGCCAT ATTGTATAAC ACCCATGTCG CCTTTGGTTA TGAGTACGCA CAAATCGAAG CGGGTTACCG AGAACACTGG TTATCGCCAA TGCAAGATTC AGCTTTATTA AGTAGTACCA ACGCCGAGCC AAGCCTGTCT GTTACTGTGA GTAACGCCAC CCCTATCACA GATTGGGGTA TCCGATATGA GCTGTTTTAT TCGAAGCTTG AAGATACGCT GGGCGTTAGC CAACAAGGTG AATTGTTCAG TGGTGAACCC AATCTATTAG GCTTTCACTT GAGTGTATCC CCTGTTGAAG CGTGGACCAT AGGCTACAGC CGCACCCTGA AATATGCTGG AGCGAATAAC AACTTGAGTG TTGGTGATGC TTTCCAAGAT TTATTCAGCC CCTCAGGTGA AGATAAAACA CCTGAACTTT ATCCTCAAGC GTTAGCAAGC GATCAGAAAA CGGCAATTTC CAGTAAAATT AATTTACCCT TCGCTTTCCC TGTATCTCTT TATGGCGAGA TTGCCTTTGA CCACGCTCCT GAAAGCAAGG ATCAAGAAGC AGATGACAAA GCCCTTGCTT TTGGGGTCTA TTTCCCTATG GTAACCAACA ACCTGTCTTT GCGATATGAA TTCACTCGCT TAGACGAGCT TTTCTACCAA TCCAGCTTCT ACACCACAGG TTACACCAAT GAAGGCTTAT CACTTGGTCA TTGGGCGAGC GATCTTTTTG CTTCCCAAGA TCAGGTTCAA AAGACAACGC ATTCGGTCAA CATGAATTGG AAATTTGCGT CTGATCAGGT TATTGATATC ACATTCAGAA GTGCAGATAG CGACATGAAC TCAAACACGG AACAAGCATT CAAGGAATTA ACGGTGCGTT ATAGTTACGC GACACAATAC GGTTTCTGGG GTATTGATCT TGATGTAGGT GAAGATCGTT TTGGCGAACA ATTTAAACGA GTAAGTGCAT TTTACCGCTG GTAA
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Protein sequence | MSRYWVIGFL LVASQGWAKG LSPYLPLQIS PEIESQIEKV MALTPGAPLT KPYKAVDIMR RNKLIATRFP ELHRSVDAYL ARFKDTLALT HVSASISAGD DESSPVPNQR GIKRDSSYQI SASGVAFISP YAYVAGGALY ADGEDAILYN THVAFGYEYA QIEAGYREHW LSPMQDSALL SSTNAEPSLS VTVSNATPIT DWGIRYELFY SKLEDTLGVS QQGELFSGEP NLLGFHLSVS PVEAWTIGYS RTLKYAGANN NLSVGDAFQD LFSPSGEDKT PELYPQALAS DQKTAISSKI NLPFAFPVSL YGEIAFDHAP ESKDQEADDK ALAFGVYFPM VTNNLSLRYE FTRLDELFYQ SSFYTTGYTN EGLSLGHWAS DLFASQDQVQ KTTHSVNMNW KFASDQVIDI TFRSADSDMN SNTEQAFKEL TVRYSYATQY GFWGIDLDVG EDRFGEQFKR VSAFYRW
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