Gene Patl_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0017 
Symbol 
ID4171842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp21516 
End bp22262 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID638053011 
ProductTraT complement resistance 
Protein accessionYP_659604 
Protein GI109896349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.10549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ATGTTCGTTC CGCCAAAATC GCATTCGTCG GACTCGCTAT TTTAGCTTTA 
ACAAGTTGCG CTGCGGTTCA CACATCAATA GCCAAAAAGG ACTTAGATGT TCAAACTAAA 
CTCAGCACTT CAATCTTTGT TGATGCCGTC CCACCTGAAA AACGCAAAGT GTATTTAGAA 
GTACGCTCTG CCGTGATGGA ATTTGACCGA AATGCATTTA GACAAGCGCT TAACGAACAA 
ATTTCTGGTA GCGGTAATGG CTACTCTTTT GTGGATAGCC CAGATAAGGC CCAGTACACC 
ATGAGTGTTT TTGTGCGCAA CCTTGAGAAA GCATCACCTA GCGCCGCTGA AAACTATCTT 
TCTAGTGGTT TTCAAGGTGT AGCAGCTGGT TCAGCTATTG GCTACGCAAC CGGGGGGAGC 
TACCGAGGTG CTGCAGCAGC GGGCCTAATT GGTGGTTTAG CATCAACGGC AGCAAACGCA 
TTCGTTAAAG ACGTTACCTA TTTACTTGTT GCTGATATTC AAATTCGTGA GCGCGCTAAG 
AAAGGAGTCA TCGTACGTCG TGACTCTAAG GTCAACAGCA AAATCTCTGA TGACGGCGCT 
ACAACGCAAA CCTATTCTGA AGCGACAAAT CAAAAAGAAT ATCGTACACG TGTTGTGACC 
ACCGCTAATA AAGCGAATCT TGAACTAGAA GAAGCACAGC CTCTTATGTT CGAAAAAACG 
GCTTACGCTA TGGCATCTTT CTTCTAA
 
Protein sequence
MKNYVRSAKI AFVGLAILAL TSCAAVHTSI AKKDLDVQTK LSTSIFVDAV PPEKRKVYLE 
VRSAVMEFDR NAFRQALNEQ ISGSGNGYSF VDSPDKAQYT MSVFVRNLEK ASPSAAENYL 
SSGFQGVAAG SAIGYATGGS YRGAAAAGLI GGLASTAANA FVKDVTYLLV ADIQIRERAK 
KGVIVRRDSK VNSKISDDGA TTQTYSEATN QKEYRTRVVT TANKANLELE EAQPLMFEKT 
AYAMASFF