| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0003 |
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| Symbol | |
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| ID | 4171828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2667 |
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| End bp | 3758 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638052997 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | YP_659590 |
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| Protein GI | 109896335 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0752559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGG ACTCAGTCCA GATCCGCAAT TTGCGTAATC TGCAGCATGT TACATTCAAA
CCTAGTCATG GTGTAAATTT CATCTTGGGA ATCAATGGTA GTGGTAAGTC TTCAATTTTG
GAGGCCATAC ACTACCTTGG GTTTGGTCGC TCCTTCCGTA CCTCGAAACA TAAAAATGTC
ATTCAAAACG AGCAAGAATC TTTTACTGTT TTTTGCGAGT GTCTGGAAGA TAGTACGACT
CAACGATTAG GCTTATCTCG CAGCATCAAC GACACCGTTA GCGTCAGTAT TAACGGCATA
AAAGGTAATA AGGTTTCGGA TTTAGTTAGT CTTTTACCCG TTCAAATATT TACTCCTCAA
AGTTCCGATA TTTTATTAGG GGCCCCAAAA CTCCGGCGGA AATACATAGA TTGGTGTTTG
TTTCACGTGG AACATAGTTT CCTTACTTGC TCAAATGCTT ACTCTAGATT ACTCAAACAT
AACAATGCGC TATGTCGCAA ACAACAAGTA GGGTATGCGA ATCCGCAAAG AGTATATTGG
ACGGATTTAC TCGCACAATA TGGCTCGGAG CTAACAGAGT TTCGAAACGC GATGATGACG
CGGCTTATCC CGTTAATTAC TTCCAATCTT GCGCAATTTT TACCTGAGTT TTGTGTCGAA
ATCTCGTATT ATAGGGGATG GGAAAAAGGT CTCGAATTAA ACGAAGCCTT AACAAAGTCG
GCGGACCGTG ATTATAAAAA TGGTTACATT AGCGTTGGTC CACATAAGGC TGACGTCAGA
TTTAAAATAA GTGGCAAACC TGCACAGGAG GTGTTGTCTC GCGGGCAACT GAGGATGCTT
GTAGCCGCTT TACAGTTAGC GACCACACAG TGTTTGATGT CCTACACACA AAAGACCTGT
ATTTTCTTAT TAGATGATGT TGGTGCGGAA TTAGACGCAG CAAAACGAGA AGTGTTTATT
GATAGACTTC TTGAATCAAA TACTCAACTT TTCGTTACGG CGATAGAAGA GCATCAACTA
GAATTTATAG ATAAATACCA AAATAAAAAA ATGTTTCACG TGGAACATGG CCAGGTGAGA
GAGGAGAGTT AA
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| Protein sequence | MKLDSVQIRN LRNLQHVTFK PSHGVNFILG INGSGKSSIL EAIHYLGFGR SFRTSKHKNV
IQNEQESFTV FCECLEDSTT QRLGLSRSIN DTVSVSINGI KGNKVSDLVS LLPVQIFTPQ
SSDILLGAPK LRRKYIDWCL FHVEHSFLTC SNAYSRLLKH NNALCRKQQV GYANPQRVYW
TDLLAQYGSE LTEFRNAMMT RLIPLITSNL AQFLPEFCVE ISYYRGWEKG LELNEALTKS
ADRDYKNGYI SVGPHKADVR FKISGKPAQE VLSRGQLRML VAALQLATTQ CLMSYTQKTC
IFLLDDVGAE LDAAKREVFI DRLLESNTQL FVTAIEEHQL EFIDKYQNKK MFHVEHGQVR
EES
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