Gene Rxyl_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3198 
Symbol 
ID4114995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3210927 
End bp3211712 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID638037963 
ProductGntR family transcriptional regulator 
Protein accessionYP_645915 
Protein GI108805978 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGCAG GGAGGTATGG CCTGACCACG CTCAGCAAGA GCCTGCTCTA CGTTGAGGTA 
GAGCGTCAGA TAGAGGATCT GCTGGTTCGG AAGCGGTACC GGGTGGGCGA CAGGATCCCG
CCGGAGGCGG AGCTGGTGGA GAGCCTCGGG GTCTCTCGGG CGACGGTGCG GGCCGGGCTG
GGGAGGCTCG TAGAGAGGGG TCTTCTGGAG CGGCGCCAGG GAAGCGGCAC GTTCCTGGTA
CGTCCCCCCG AGGGCGTACG GCTGCGCAAC GGACTGGAGC GGCTGGAGTC CTATACGGTG
CAGGCCGAGC GGCTGGGCCT GGAGCTCGGC AGCCGGGGAC TCAAGGTGGA GAGGGTCGTC
GCGGGATCCG AGGAGGCGTC TGCCCTGGAG GTCCCCGAGG GAACACCGCT GGCTCGGGTG
GAGAGGGTTC TCCTGGTGGA CGGCGAGCCG GCGGCATGGA TGCTCGACGT GGTGCCCGAA
GAGATCATGT CCGCAGAGGA CGTGCGGGAG GGGTTCGACC CGAACGCCAT GCTGCTGGAC
CTGCTCGTCT CGAGGGGGGT GCCCATCACC TACAGCAAGC TCCTCATAGA CGCCGAGCTC
ATCTCCCCCA ACGACCAGAC CGGGAAGGCC CTCGAGCTGA GCTCCGCGTC GGCCGCGCTC
TCGCTCGTCG AGACCATGTA CCTCGAGAAC GGCCGGCCCG CGCAGTGGTC GCGCAACATC
TTCCTGCCGG GGCGCCTAGA CCTGCACGTG GTCAGGGAGC TCTACGAGGT GCGCAGGCTC
TCCTGA
 
Protein sequence
MAAGRYGLTT LSKSLLYVEV ERQIEDLLVR KRYRVGDRIP PEAELVESLG VSRATVRAGL 
GRLVERGLLE RRQGSGTFLV RPPEGVRLRN GLERLESYTV QAERLGLELG SRGLKVERVV
AGSEEASALE VPEGTPLARV ERVLLVDGEP AAWMLDVVPE EIMSAEDVRE GFDPNAMLLD
LLVSRGVPIT YSKLLIDAEL ISPNDQTGKA LELSSASAAL SLVETMYLEN GRPAQWSRNI
FLPGRLDLHV VRELYEVRRL S