Gene Rxyl_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3072 
Symbol 
ID4114872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3078713 
End bp3079198 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content74% 
IMG OID638037840 
Producthypothetical protein 
Protein accessionYP_645792 
Protein GI108805855 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGGA ACGAGGTGCC GAAGAAGATC CTCGTCGCCG TGGACGGCTC TCCCGACTCG 
ATCCTGGCGG GCCGCCGCGC CGCGGCGATG GCTGAGGCCT TCGGGGCCGA GCTGTATCTG
GTGCACGTGG TCCCCGTCTC GGAGCCGGTG CGGCTCCTCG GGGAGGCCAT AGGCGGCCCC
GGGCTCTACG AGGAGGACCG CCGGCGCGCC CGGGACCTGC TGGACAGGGA GGTCCGGCGT
GTGGAAGAGG AGGGGGCGAA GGTGAGCGGC GCCTGCCTGC GGGGCGGAGA GCCCGCCGCG
GAGGTGGTCG CGCTCGCCGA GAGGCTCGGG GTGGATCTCA TCGTGCTGGG CAGCAGGGGG
CTCGGGCCTC TGGCCCGCAT GCCCATAGGC AGCGTCGCCT CCGGCGTCGC CGCGCACGCC
CCCTGCCCGG TCCTGGTGGT CAGGGGGGAC GGGCGCGATG GACCCCCGGG AAAAGACGGG
CCATGA
 
Protein sequence
MTGNEVPKKI LVAVDGSPDS ILAGRRAAAM AEAFGAELYL VHVVPVSEPV RLLGEAIGGP 
GLYEEDRRRA RDLLDREVRR VEEEGAKVSG ACLRGGEPAA EVVALAERLG VDLIVLGSRG
LGPLARMPIG SVASGVAAHA PCPVLVVRGD GRDGPPGKDG P