Gene Rxyl_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3071 
Symbol 
ID4114871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3077788 
End bp3078741 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content74% 
IMG OID638037839 
Producthypothetical protein 
Protein accessionYP_645791 
Protein GI108805854 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCCC GGGAAAAGAC GGGCCATGAG GTTCCGGAGG TGGGTATGTT GATCGCCAGG 
GTCCTTGTGG CAACCGACGG CTCCGAGGGG GCCAGGCTCG CCGGCCGCGC GGCCGCGGAC
ATAGCGAGCA GGACGGGCGC GGAGTTGCAC CTCGTCCACG TTTGGCGGCT GGTGCCAGCT
CACGCCGCCT ACCCGGGCGT GATGTGGACC GACTACTCGT ACCTCAGCGA GGACGAGGCG
CGGAGGCTCC TCAAGAGGGA GGCCGCCGGG ATCGCGGAGT CCGGCGGGCG GATCGCCGGG
ACGCACCTGG TGCAGGATGC GCCCGCCGGC GGGATACTCC GGCTCTGCCG GAGGTTGAGG
CCGGATCTCC TGGTCCTGGG AAGCCGGGGA CTCGGAGCGC TCGGGCGCCT GGCCCTGGGC
AGCGTCTCCG AGGCGGTCGC GCACCGGGCC GGGTGGCCGG TGCTGGTCGT GCGCGGCGGC
GAGGAGGCCT GGCCCCCGCG GAGGGTGGTT GTGGGCGACG ACGGCTCCCA GGCTGCCGCT
GCCGCTGGCG AGCTCGCCGC GCTCATCGGC GGCCTCTTCG GCGCGGAGGG CGTGGTGGTC
AGGGCCTTCC GGTCCCCTCC GGGGGCCGGG GAAGCCGGGG AGTTCGAGGA GGCTCTCTAC
TGGGAGGGGC AGGCCCTGGA AGGGCGGGCG TGGAGGATCG GCAAGGTTCT CGGGAGCCGC
CCTGTGGCTC GGCTGGTGGA GGGGGACGCG GCGGCCGAGA TCCTGCGGGC CGCCGCCGAG
GGCGGCGATG AGCGGAGGTC TCTGGTGGCG GTGGGGAGCC GCGGCCTGGG GGCGGCGGGC
CGCCTCCTCC TGGGCAGCGT CTCGACCAAG CTCCTGCGGG CCGCCGGGGG ATCCGTGCTG
GTCTGCCCGC AGCGATCCCC GTTCGTCTCG CGGTACGATG AGGGGCTCGC TTAG
 
Protein sequence
MDPREKTGHE VPEVGMLIAR VLVATDGSEG ARLAGRAAAD IASRTGAELH LVHVWRLVPA 
HAAYPGVMWT DYSYLSEDEA RRLLKREAAG IAESGGRIAG THLVQDAPAG GILRLCRRLR
PDLLVLGSRG LGALGRLALG SVSEAVAHRA GWPVLVVRGG EEAWPPRRVV VGDDGSQAAA
AAGELAALIG GLFGAEGVVV RAFRSPPGAG EAGEFEEALY WEGQALEGRA WRIGKVLGSR
PVARLVEGDA AAEILRAAAE GGDERRSLVA VGSRGLGAAG RLLLGSVSTK LLRAAGGSVL
VCPQRSPFVS RYDEGLA