Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3029 |
Symbol | |
ID | 4115965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 3036923 |
End bp | 3038053 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638037799 |
Product | major facilitator transporter |
Protein accession | YP_645751 |
Protein GI | 108805814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000550731 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTC CGATGGCTTT CGTCCTGCTG GCGGCGCTTG GCACCTTCAC TAACGTCAAC CTACTCTTGC CCGTCATGCC TCTCTACGTG GCAAGATCCG GTGCGGGAGA TTTCTTTGCG GGGCTTGCGA CAACGGCCCT GTTGCTTACC ACGGTCGTCG CGCAGATAGG GACGCCGCGC GTGCTGGGCC GGTGCGGGTA CTCCTCAACC CTGATAGCAG GTATGGTCCT CCTCGGGGTC CCGTCCGCGT TCTACGTGTG GACGGATGCG GCCGTCCCGT TGCTCGGGAT CACGCTGGTG CGCGGACTGG GCTTTGGTGT CGCGACGGTG GCCTTCGCGG CACTGGTTAC AGACCTCTCC CCACCGGAGA GGCGCGGTGA GGGGATCGGA CTGTACGGCG TCGCATCCAC GCTCCCGGCC GTCTTCGGCC TTCCGCTCGG CCTGTGGCTG GTGAACTGGC TCGGCTACGA GACCGTCTTT CTGGCTGGCG CTGCCGGCTG TGTTGTCGGG GTCGCCGGGG TGCTGGCCGC ACGGGTCAAT GCAGTGGACC CGCCAGACGG CTCGGCCGGC TTTGTCGCGG GGATGCGCCG CTCCTCCCTG CGGCGGCCGC TTTTTGCCTT TGTTTCGACC ACCGTTGCAG CGGGGGTCCT GGTTACGTTC CTTCCGCTCG CCTCTCCGGG TTCGGGTTTG GACTCCGCCG CGACCGCGCT CCTGCTCTGG GGTTTGGTGC AGACAGCTGC AAGATGGTGG GCTGGACGCG CCACCGACCG CTCCGGAGCA GAGCGACTGA TACAGCTCTC CCTGGTCCTG AGCGGCCTCG GCATGCTGGC CGTGAGCCTG CCGGAGAACC CCGTCATGCT CCTCACCGGC GCTGTCCTGA ACGGTGTGGG CTTCGGGGTT CTCCAGAATG CCACTCTCTC CGTACTCACA GACCGCGTCC CGCGCTCCGA GTACGGTATG ATCAGCACCC TCTGGAACGT CGGCTTCGAC GCCGGAGCCG GAGCCAGTCC GCTCGTCTTC GGCCTTATTG CCGCGGGCGC CGGATACCCT TTTGCCTTCG CTGCGACCGC TGCTCTCATC TTCGCCTCCC TGGTATTTGC CCGCCCCGAT GCTGTAGAGA ATAAAACGTA G
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Protein sequence | MSRPMAFVLL AALGTFTNVN LLLPVMPLYV ARSGAGDFFA GLATTALLLT TVVAQIGTPR VLGRCGYSST LIAGMVLLGV PSAFYVWTDA AVPLLGITLV RGLGFGVATV AFAALVTDLS PPERRGEGIG LYGVASTLPA VFGLPLGLWL VNWLGYETVF LAGAAGCVVG VAGVLAARVN AVDPPDGSAG FVAGMRRSSL RRPLFAFVST TVAAGVLVTF LPLASPGSGL DSAATALLLW GLVQTAARWW AGRATDRSGA ERLIQLSLVL SGLGMLAVSL PENPVMLLTG AVLNGVGFGV LQNATLSVLT DRVPRSEYGM ISTLWNVGFD AGAGASPLVF GLIAAGAGYP FAFAATAALI FASLVFARPD AVENKT
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