| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3023 |
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| Symbol | |
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| ID | 4115959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3029834 |
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| End bp | 3031024 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638037793 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_645745 |
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| Protein GI | 108805808 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGA TACGCGTGTT GCTTAACCCG CTTGCCTCTG CGAGCCCGGT AGATGCCGGG
CCTCCTGGAA GAGAGCCTCT GGAGTTCCAC CGCCGCCTGC CGGGGTACGC CCCAACTCCT
CTCATGGATA CTCCAAGGCT GGCAGACTCT CTTGGTGTCA GACGGGTGTG GGTGAAGGAC
GAGTCGCACC GGCTCGGGCT GCCGGCCTTC AAGATCCTTG GTGCCTCCTG GGCCACCTAC
CGTGCCCTTG AAGAGCATGC AAGAGAGCGT CTTGGCAGCG GATTTGAGCC ATGGCAGAGC
ATTGAAGAGC TCAAGGAGAA GGTTGAGCAT CTCAAGCCCC TCACCCTAGC GGCGGCCACC
GACGGCAACC ACGGGCGGGC GGTTGCCCGC ATGGCGAGGT TGCTTGGGCT ACGCTCGCGT
ATCTTTGTGC CTTCAGAGAT GGTTCGGGCG CGCATCGAGG CCATTGAGTC CGAGGGAGCA
GAAGTTGTTG TGGTCGACGG GACCTACGAC GACGCCGTAG CGCGCTCGGC CGAGGAAGCG
GCCGAGCGGT GTCTGGTGAT CTCCGACACC TCTTGGCCCG GGTACACCAG TGTACCGCGC
TGGGTGATAG AAGGCTACTC GACCATTCTG TGGGAGATAG ACCGGGAGCT TGAGCGCCGC
GAAGAGAAGG GCCCCGACCT TGTGGTAGTC CAGATTGGGG TGGGTGCCTT TGCCGCGGCG
GTGACTCGCC ACTATCGCGC TCCCGGAGCC CCGAGTAGAC CCAAGCTGCT CGGTGTTGAG
CCGGAGAGAG CTGCTTGCAT GCTCTCCTCG GTTGAGGCCG GACACCCGGT TCAACTTCCC
GGACCGCACA CCTCTGTTAT GGCGGGTCTG AGTTGCGGCA CGCCGTCTCT TATCGCTTGG
CCTCTGGTCT CCAGAGGAGT GGACGTTTTT ATTGCCATAG AAGATGAGTG GGCAAAAGAG
GCGATGAGGG AGTTGGCCCG CTCAAACATA GTTTCTGGCG AGACGGGTGC GGCCGGGCTT
GCGGGACTTC TGGCGTTGCT GAAAAGCAAG ACCGGCGCGG AGGCTCGGAA ATTAATCGGG
CTTAACGAGG AGGCCAGTGT TCTGATATTC AACTGCGAGG GAGCAACGGA CCCGGAGTCT
TACGCACGCG TGGTCTACGG AGCAAACAAA GCTGTGTCCG AAAATCCTTG A
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| Protein sequence | MSRIRVLLNP LASASPVDAG PPGREPLEFH RRLPGYAPTP LMDTPRLADS LGVRRVWVKD
ESHRLGLPAF KILGASWATY RALEEHARER LGSGFEPWQS IEELKEKVEH LKPLTLAAAT
DGNHGRAVAR MARLLGLRSR IFVPSEMVRA RIEAIESEGA EVVVVDGTYD DAVARSAEEA
AERCLVISDT SWPGYTSVPR WVIEGYSTIL WEIDRELERR EEKGPDLVVV QIGVGAFAAA
VTRHYRAPGA PSRPKLLGVE PERAACMLSS VEAGHPVQLP GPHTSVMAGL SCGTPSLIAW
PLVSRGVDVF IAIEDEWAKE AMRELARSNI VSGETGAAGL AGLLALLKSK TGAEARKLIG
LNEEASVLIF NCEGATDPES YARVVYGANK AVSENP
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