Gene Rxyl_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3004 
Symbol 
ID4115803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp3012365 
End bp3013057 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID638037774 
ProductGntR family transcriptional regulator 
Protein accessionYP_645726 
Protein GI108805789 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0317071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGTG AGGGGCGGTC GCTGACGGAG GAGGCGATCC TGCGGTTGAA GGCCATGATC 
CTCTCGGGGG AGCTTGCGCC GGGGGAGCGG CTCCCGGTGG AGAGGGAGCT CGCGGCCCGG 
CTGGGGATCT CGCGCAGCTC GCTGCGGGAG GCGGTCCGGG CGCTGGCGCT GGTAGGGGTG 
CTGCGGACGC GCCGGGGCGA CGGTACCTAC GTGACGAGCC TGGAGCCGGG GCTGCTGCTG 
GAGGCCACGG GGATGGTGGC CGACCTCCTG CAGGAGAGCA GCCCGGTCTG GCTGCTGGAG 
GTGCGCAGGA TGCTGGAGCC GGGGGCCACC GCCCTGGCCG CCGCCCGGAT GTCGCCGGAG 
GAGCTCTCCG GGCTGCGGGA GTGCCTCGAG CGCCTGGAGA GGGCCCCCGA CGTGGAGGAG 
CTCATCGCCG CCGACGACGA GTTCCACGCC CGTATCGCCG ACGCCGCCGG AAACCCGGTC 
CTCTCCTCCC TGTTGCGCAG CCTCGCCGGA CGTACCCTCA GGGCCCGGCT CTGGCGCGGC 
GTCTCCGACG CCGACGCCCT GGAGAGGACC CGCCTCGGCC ACCGCGCCAT CTTCCGGGCC 
ATCGAACGCC GCGACCCCGA GCTCGCCCGG GCCGCCGCCG CCTCCCACAT AGCCGAGGTC 
GAGGACTGGT TCCACAGAGG GGCGCCCGCC TGA
 
Protein sequence
MMGEGRSLTE EAILRLKAMI LSGELAPGER LPVERELAAR LGISRSSLRE AVRALALVGV 
LRTRRGDGTY VTSLEPGLLL EATGMVADLL QESSPVWLLE VRRMLEPGAT ALAAARMSPE 
ELSGLRECLE RLERAPDVEE LIAADDEFHA RIADAAGNPV LSSLLRSLAG RTLRARLWRG 
VSDADALERT RLGHRAIFRA IERRDPELAR AAAASHIAEV EDWFHRGAPA