Gene Rxyl_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2920 
Symbol 
ID4117399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2926246 
End bp2926878 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID638037690 
Productsuperoxide dismutase 
Protein accessionYP_645642 
Protein GI108805705 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTACG AACTTCCGCC ACTGCCCTAC GACTACAACG CGCTGGAGCC CTACATAGAC 
GAGGCCACCA TGCGCTTCCA CCACGACAAC CACCACAACA CCTACGTGAC CAACCTCAAC 
GCTGCGCTCG AGAAGCACCC GGACGTGGAC CCGGGCAACG TGGACGAGCT CATCGCCGAC 
CTCAACGCCA TCCCGGAGGA CATCCGCCGG GCGGTGAGGA ACAACGGCGG CCAGCACTCC 
AACCACTCCA TCTTCTGGCA GATCATGGCC CCCTCCGGCG CCGGGGGCGG CGGGGAGCCG 
ACCGGCGAGC TGGGCGAGGC CATAAACGGC ACCTTCGGCT CCTTTGACGC CTTCAAGGAG 
CAGTTCGCCG CCGCGGCGGC CCCGGGGGCG CTGTTCGGCT CGGGCTGGTG CTGGCTGGTG 
GTGACCTCCG GCGGCCAGCT GGCGATCAAG ACCACCCCCA ACGGCGACTC GCCGTACATG 
GAGGGCGAGA TCCCCGTTAT CGGGCTGGAC TGCTGGGAGC ACTCCTACTA CCTGAAGTAC 
CAGTACCGGC GGCCGGAGTA CGTCCAGAAC TGGTGGAACG TGGTGAACTG GGAGGAGGCG 
AACCGCCGCT ACCAGGCGGC CCGCTCCTCC TGA
 
Protein sequence
MAYELPPLPY DYNALEPYID EATMRFHHDN HHNTYVTNLN AALEKHPDVD PGNVDELIAD 
LNAIPEDIRR AVRNNGGQHS NHSIFWQIMA PSGAGGGGEP TGELGEAING TFGSFDAFKE 
QFAAAAAPGA LFGSGWCWLV VTSGGQLAIK TTPNGDSPYM EGEIPVIGLD CWEHSYYLKY 
QYRRPEYVQN WWNVVNWEEA NRRYQAARSS