| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2892 |
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| Symbol | |
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| ID | 4117353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2893971 |
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| End bp | 2894948 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 638037663 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_645615 |
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| Protein GI | 108805678 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.32058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCCTGC GCCTGGAGGC GGAGGGGGCC TCGGGCTGGG GGGAGGCCGC GCCGCTTTCG
GGCTTCTCCC GGGAGACGCC CGCGCAGGCG GCCCGGGCTC TCCAGAAGGT CCTGCCCGGC
CTTCTGGGGC TCGACCTCGA GGAGGCGCGC CTCCCCCGCG GGGGGCTTCC CCCTTCGGCC
CGCTTCGCGC TGGAGCTGGC GCTGCTCGGG GCGCGGGCGG CGGCCTCCGG ACGCCCGCTG
CCGGAGCTGC TCTCCCCGAG CCCGCAGCCG GAGGTGGAGG TGAGCGCCCT GCTCTCTGGC
CCTCCGGAGA CCGTGCTGGA GGAGGCCCGC CGGATGCGCG CCGCCGGCTA CCGCGCCTTC
AAGCTCAAGG TCGGCGGGCG GCCGGTGGAG GAGGACGTCC GGCTCGTGCG CTCGCTCGGC
GAAGAGCTGG GCGGGAGCGT GACGCTGCGG CTGGACGCCA ACCGCGCCTG GGAGTTCCCC
GAGGCGCTGC GCTTCGCGGC GGCCGGGCTG CGCTTTCTGT ACGTCGAGGA GCCGCTGCGC
GACCCGGCGG GCCTGCCGGA GCTGGTCCGC CGGGGGAACC TGCCGGTCGC CCTCGACGAG
TCGCTCTTCG GGATGGAGCC TGAAGGCCTC GCCGGGCACC GCTACGCCCG CGCCGCGGTG
CTCAAGCCCA CGCTCCTCGG CGGGCTCTCG CGGACGCTGC GCTTCGCCCG CGCCGCCCGT
GAGCTGGGGA TGGAGGTGGC GGTGAGCTCC GCCTACGAGA GCGGGGTGGG GACGCTCGGA
CTGCTCGCCC TCGCCGCAGC CTGCGGCGCC CCGGCCGGCC TCGACCCGTA CCGCAGCCTC
GCCCGCGACG TGCTCCGACC CCGCCCCGCG CTCGCCGCCC CGCGCCTCGT GGTGGGGGCG
GCGTTCTCCG CCCGCCGCGC GGTGGCGCGG GAGGCTCTGG AGGAGCTTTT GGGGGACGCG
GGCGGAGGGG GTGAGTAA
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| Protein sequence | MLLRLEAEGA SGWGEAAPLS GFSRETPAQA ARALQKVLPG LLGLDLEEAR LPRGGLPPSA
RFALELALLG ARAAASGRPL PELLSPSPQP EVEVSALLSG PPETVLEEAR RMRAAGYRAF
KLKVGGRPVE EDVRLVRSLG EELGGSVTLR LDANRAWEFP EALRFAAAGL RFLYVEEPLR
DPAGLPELVR RGNLPVALDE SLFGMEPEGL AGHRYARAAV LKPTLLGGLS RTLRFARAAR
ELGMEVAVSS AYESGVGTLG LLALAAACGA PAGLDPYRSL ARDVLRPRPA LAAPRLVVGA
AFSARRAVAR EALEELLGDA GGGGE
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