| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2862 |
|---|
| Symbol | |
|---|
| ID | 4115859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2866878 |
|---|
| End bp | 2868038 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638037633 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_645586 |
|---|
| Protein GI | 108805649 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAG CGGGCGGGCG AGATATGCTG GTCATCGCGG CGCCGGAGCA TGACGCCGCG
GCCTACCATC TCACGGGCTT TCTGGCGCCG GACCCGGTGA TCTTCTTCCG CGTCGGCGGC
AGGGGGCACC TGGCGGTCTC CGCGATGGAG TACCCCCGGG CGCGCAGGGA GGCCCGGGTG
GAGGAGGTGC TCTCGTTCGA CGAGCTGGGG GTGGAGGAGC TGGCGCGCGA GCTGCGCGAC
GGTCACCGGG CCTACGCCGC CGCGGCAGCG CGGGCGCTCC TGGAGCGGAG CGCGAAGAGC
GTGGCGGTGC CCCCGGGCCT CGGCGTGGCC TACGCCGACG AGCTGCGCGC CCGGGGCGTG
GAGCTCTCCC CCGACGGGCC GCTCTTCTCC CGGATGCGGC GCCGCAAGAC GGAGCGGGAG
ATCTCCTGCA TAGAGAGGAC CCAGCGGGCG GTCGAGGAGG CCTGCCAGCG CGCGCTCGGC
ATCCTCCGGG AGGCCGGCGT CGGGGAAGGC GGCGCGCTCT CCTGGCGCGG CGAGCCCCTG
ACCAGCGAGC GGCTGCGCTC CGAGATAGAC GTCGAGCTGC TCCGCAGGGG GTGCGCCGCG
GAGGGGACCA TCGTCGCCGG GGGCCCGCAG GCGGCCGACC CGCACGAGCG CGGGAGCGGC
CCGCTGCGCG CCGGGGAGAC GATCATCGTG GACGTCTTCC CGAGGGACCA GCGCACCCGC
TACTACGCCG ACATGACCCG CACCTTCGTC AAGGGCGAGC CGGACGGGAA GCTGGTGCGG
ATGCACGAGG CGGTGCTCGA GGCGCAACGG GCGGCGCTGG GCATGATCCG GGCCGGCGTA
AACGGCCGGG ACGTCCACCG GAAGGTCTCC GAGGTGCTGC ACGAGGCCGG CTACAAGACC
GCCCTGCACG ACCGGCGGGA GGGCCGGCCG CTCACAGAGG GGTTCATGCA CGGCACCGGC
CACGGGGTGG GGCTCGAGAT CCACGAGGCC CCCCGGATCT CGACGGCCGA CGAGGAGCTG
CTCGCCGGGG ACGTGGTGAC GGTGGAGCCG GGGGTCTACG ACCCGGAGGT GGGGGGCGTC
AGGATCGAGG ACCTCGTCGT GGTTACCGAG GAGGGCTGCA GGAACCTGAC CCGGTTCCCA
AAGGAGCTCG TGGTCCCCTG A
|
|---|
| Protein sequence | MEPAGGRDML VIAAPEHDAA AYHLTGFLAP DPVIFFRVGG RGHLAVSAME YPRARREARV
EEVLSFDELG VEELARELRD GHRAYAAAAA RALLERSAKS VAVPPGLGVA YADELRARGV
ELSPDGPLFS RMRRRKTERE ISCIERTQRA VEEACQRALG ILREAGVGEG GALSWRGEPL
TSERLRSEID VELLRRGCAA EGTIVAGGPQ AADPHERGSG PLRAGETIIV DVFPRDQRTR
YYADMTRTFV KGEPDGKLVR MHEAVLEAQR AALGMIRAGV NGRDVHRKVS EVLHEAGYKT
ALHDRREGRP LTEGFMHGTG HGVGLEIHEA PRISTADEEL LAGDVVTVEP GVYDPEVGGV
RIEDLVVVTE EGCRNLTRFP KELVVP
|
|---|
| |