Gene Rxyl_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2813 
Symbol 
ID4117645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2822012 
End bp2822659 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content75% 
IMG OID638037584 
ProductTetR family transcriptional regulator 
Protein accessionYP_645538 
Protein GI108805601 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCACG AGGAGCGCAG GCGGGAGCTG GCGGAGGCGG CGTGGCGCGT GATCCTGCGC 
GAGGGCGTCG AGGGCGTCTC GGTGCGCAAC GTGGCCGCGG AGGCGGGGTG GTCCGTGGGT 
GCCTTACGGC ACTACTTCGG GACGAAGGAG GAACTTTTGG CCGGGGCGGC CCGGCTCGTG 
GTGGAGCGCG TGACGGGGCG TTTCGAGCGC GGGCGCTACG AGGGCCCCCC GCGCGAGGCG 
GTACGGAGGA TGCTGTGCGA GGTGCTGCCG CTGGACGACG AGCGCCGGGT CGAGGCGCGG 
GTCTGGCTCG CCTTCGCCGC CCACAGCCTC GTGGACCCGC GCGTGGCCGA GGAGCACGAG 
CTGGTCTTCG ACGGGATGCG CGAGCTCTGC CGACTCATCG TCCGCAGGCT CTCCGAGGAC 
GGGCTCCTCG TCTCCGGGGC CGGGGACGAG GAGGAGGCGG CCCGCCTGCA CGCGCTCGTG 
GACGGGCTGG CGCTGCACGG GCTGCTGGGC CGCCTCGGAA GCGAGGAGAT GCTCGCCGCG 
CTCGACGCGC ACCTCGCCGC GATCATCGCC GAGCCCGGAG AGGGCGGCGC GGGACGGGGC 
CAGGAGCCGC GCGTCAACCG CGGTCGCGCT CCAGGAGGAC CATCATGA
 
Protein sequence
MDHEERRREL AEAAWRVILR EGVEGVSVRN VAAEAGWSVG ALRHYFGTKE ELLAGAARLV 
VERVTGRFER GRYEGPPREA VRRMLCEVLP LDDERRVEAR VWLAFAAHSL VDPRVAEEHE 
LVFDGMRELC RLIVRRLSED GLLVSGAGDE EEAARLHALV DGLALHGLLG RLGSEEMLAA 
LDAHLAAIIA EPGEGGAGRG QEPRVNRGRA PGGPS