Gene Rxyl_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2792 
Symbol 
ID4117625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2802633 
End bp2803274 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content74% 
IMG OID638037564 
ProductTenA family transcription regulator 
Protein accessionYP_645518 
Protein GI108805581 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.810645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCCGC GGGATCTCCT TGCGCGGCAC CAAGAGCTCT GGCGCGGGGC CACCCGCCAC 
CCCTTTCTCG ACGGGGTGCG CGAGGGGACG CTCCCCCGGC GGGCCTTCGA GAGGTGGCTG 
GTGCAGGACT ACCTGTTCGT CCGGGAGGGG CTCGCGTTCC AGGCGCGCCT GCTCGCCCGG 
GCGCCCCGGC GGGACCAGCG GCTCCTCATC GGCGGGCTCG TCGCCCTGGA GGAGGAGCTC 
GGCTGGTTCG AGGAGCAGGC CCGGCGCAGG AACCTCGACC TCGACGCGCG CCCCCACCCC 
GCCAACGCCG CCTACTGCGG CTTTCTCGCG GGGCTCGAGG GGGAGCCCTA CGCCGCCGCC 
CTCGCCGCCC TCTGGGCGCT CGAGCGCGCC TACCTGGAGG CCTGGCGGGG CGCCGCCCCG 
GGGCACCCGG AGTACCGGGA GTTCGTCGAG CACTGGACCA CACCGGAGTT TGCAGATTAC 
GTATCCGGTC TGGAGGGGGC GGCGGAGGCC GCGCTCGGGG AGGCCGGGGA AGGGGCGAGG 
GGGCGGGCGG AGGAGGCGTT CGTCGGGGTG GCCCGCTTCG AGCGGGGCTT CTGGGAGATG 
GCGTTGGAGG GAACGGAAGA GAACGGAGGG AGAGTCGGGT GA
 
Protein sequence
MRPRDLLARH QELWRGATRH PFLDGVREGT LPRRAFERWL VQDYLFVREG LAFQARLLAR 
APRRDQRLLI GGLVALEEEL GWFEEQARRR NLDLDARPHP ANAAYCGFLA GLEGEPYAAA 
LAALWALERA YLEAWRGAAP GHPEYREFVE HWTTPEFADY VSGLEGAAEA ALGEAGEGAR 
GRAEEAFVGV ARFERGFWEM ALEGTEENGG RVG