| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2666 |
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| Symbol | |
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| ID | 4115147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2680998 |
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| End bp | 2682461 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638037441 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_645395 |
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| Protein GI | 108805458 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGCCG GCCGGGGAGA GGTCCAGAGG GGGCGGAGCC TCCCGGCCCT CCTCCGGCGC
GGCGGGCCCG CGGGCAAGCG GCCGGCCCGG GCCGTCGCCT ACGCCGAGAC GCTCGCGGCC
CTCGCCCTCC TGGTGGGGGC GGGCCTCCTC CTGCAGCCGC AGAACCCGGG CTTCGCCGGG
GTCTCCCCGC ACCCCTTCTG GCTCGTCGTG ATCCCCATAG CCGCCCTGCA CGGGAGCCCA
CCGGGGTACG TGGCGGGGGC GGCCTCGGCT CTGGCCTATC TCGGGCTGGC CGCCCTGCAG
GCCGGCTCCG TGACCGACCC CGCCCTCCTG CGACCCGGCC TTCTGGCGGA GCCCGTGCTC
TTCCTGGTCG CCGGGGGCGC CCTCGGCGAG CTCCGGCAGG CCCAGCGGCG GCGGGAGGAG
GCGCTCCTGC GGAGGCAGGA AGCGCTGGAG GGCGACCTGC AGGACCTCGC CCAGCGCTAC
CTGGCCTCCG TGGAGCTCGC CCGCGAGCTC GAGCGCAGGA TAGTGGACCA GACCTCCACC
GTCACCACGC TCTACGAGGC GGCCAAGGCG CTGGAGCGGC TGGAGGTGGA AGAGCTTCCC
CCGGCGGTGC TCGAGCTCGC CAGCAGCTTC GTGGACGTCG AGGCGTGCTC CCTCTACCTC
CTGAGGGACG GCAGCTTCGT GCTCGAGGCG GGACGCCCCG AAGGCGCCCC CCGGCCGCGC
CAGCTCGACG TCGGGGGCGG GCTCCCGGCC ATCGTGGCCT CCGAGAAGCG GCTCGCCACC
GTGCACGAGC TGCTCGCCGA GCCCACCCCC GGGCGGCTGG CCCGCCAGCC GATGCTGATG
GCGGCGCCCA TCCTCGACGC CGACGGCGAG GTGGCCGGGA TGCTGGTCGC CGAGAGGATG
CCCTTTCTGC GCTTCACCCC GGCGGCGGCC CGGCTCTTCT CCCTCCTCGG GGACTGGGCC
TCGGGCGCCT TCCAGCGGGC GCTCCGCTTC AGACAGACGC GCGACCGCAA CATCGAGGAC
GACCTCACCG GCGCCTACAA CCACGCCTAC CTGCTCAAGC GGGCCGAGGA GGAGGTCTTC
CGCTCCAGAA CCTACGGCGT CCCGCTCTCG CTGCTGGCGC TGCGGGCCGA GGACCACGAG
CGGATACCGC CCGTGCGGCT GCCGGGGGTG CTGCGGACCC TGAGCCTGGT CTTCCGGCAC
CACATCCGGC CCGTGGACGT GCTGGGCCGG CACGAGGAGG AGGGCACCTT CCTGCTGCTC
TTGCCCCACC TCGGCGCGGA GGAGGCCGGG GAGCTCGCCG AGAGGCTCCG GCGGGAGGTG
GAGGGCTTCG GCTTCAGGCC CTTCGAGGAG GACGACCGCA CCCTGCGGCT CCGGACCGGC
CGGGCCACGC TCTCCGGGAA GACCGGCGGA GCGGAGGGGC TCGTCGAGGA GGCGGTGCGC
GATCTCCTGC GGGGGGGCGG ATGA
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| Protein sequence | MRAGRGEVQR GRSLPALLRR GGPAGKRPAR AVAYAETLAA LALLVGAGLL LQPQNPGFAG
VSPHPFWLVV IPIAALHGSP PGYVAGAASA LAYLGLAALQ AGSVTDPALL RPGLLAEPVL
FLVAGGALGE LRQAQRRREE ALLRRQEALE GDLQDLAQRY LASVELAREL ERRIVDQTST
VTTLYEAAKA LERLEVEELP PAVLELASSF VDVEACSLYL LRDGSFVLEA GRPEGAPRPR
QLDVGGGLPA IVASEKRLAT VHELLAEPTP GRLARQPMLM AAPILDADGE VAGMLVAERM
PFLRFTPAAA RLFSLLGDWA SGAFQRALRF RQTRDRNIED DLTGAYNHAY LLKRAEEEVF
RSRTYGVPLS LLALRAEDHE RIPPVRLPGV LRTLSLVFRH HIRPVDVLGR HEEEGTFLLL
LPHLGAEEAG ELAERLRREV EGFGFRPFEE DDRTLRLRTG RATLSGKTGG AEGLVEEAVR
DLLRGGG
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