| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2556 |
|---|
| Symbol | |
|---|
| ID | 4115387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2577943 |
|---|
| End bp | 2579223 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 638037327 |
|---|
| Product | citrate synthase |
|---|
| Protein accession | YP_645285 |
|---|
| Protein GI | 108805348 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCCGG GGGACAGGAG CGGGGGGAGG TACCTCACGG CGCGTGAGGC GGCCGAGGAG
CTGGGGGTGA GCGTGAGGAC GCTGTACGCC TACGTGAGCC GGGGGCTCGT CCGGTCGGAG
GCGGCCGGGG GCGGGCGGCG CGGCAGGCGC TACCGGGCGG AGGACGTGCG GCGGCTCAGG
GAGCGCAAGG AGCACCGGCG CGACCCGGCC CGGGCGGCGG AGGGTGCGCT CGACTGGGGC
ATGCCGGTGC TGGAGTCGGG GATCTCCCTG ATCGCGGACG GCCGGCTGTA CTACCGGGGG
CGGGACGCCG TCGCGCTCTC GGGCGAGCGC TCGCTCGAGC AGGTGGCGCA GCTGATCTGG
ACTGGGAGCA TGGCGCCGGG GGACCGCGCG GCCGTCCCCG GGCTCTTCCG GGCGGCCGCG
CGGAGCGTCG CCGGGTGTCC CCGGCTGCCC TTGGGGGGCG CGAGGCCGGT CCTGGACGAG
CTCGGGCTGG CGCTGCAGGC GGCGGCTTCG AGGGACCCGG CCGCCTACGA CCTGCGGCCC
GCCGCCGTCG TCAGGACCGG CGCGCGCATC CTGCGCCTCT TGGTGGGGGC GGCGACCGGC
GAGCAGGACG CCGGGGAGAC CGCGGCGCGG GCCTTGCAGA GACGGTGGGT CCCGCGGGAC
GAGGGGGCCG CGGAGATCCT CGACCGCGCG CTCGTCCTCT GCGCGGACCA CGAGCTCAAC
GTCTCCTCCT TCACCGCGAG GTGCGTAGCC TCCGCCGGGG CGACGCCCTA CGCCGCCGTG
GTGGCCGGGC TGGCGGCGCT CGGAGGCGTC AGGCACGGCG GCGGCACCGA GCGCGTCGAG
GCGTTCCTCG CGGAGGTGGA GGCGGCCGGT GACCCCCGGG AGGTCGTCGC CTCGCGGCTC
AGGCGCGGGG AGGCGGTGCC GGGGTTCGGG CACCGTCTCT ACCCCGAGGG GGACCCGCGG
GCCGCGGCGC TGCTAGCCGC GCTCGCCGAG GGCTACCCCG GGTCGGAGGC GCTGGGGCTG
GCCGAGGGCG CGGCCGAGGC GGCCGGGGCC CTGGTGGGCG AGCGCCCGAA CGTGGACTTC
GCGCTCGCGG TGCTCGCGAG GGTGCTGGGC CTGCCGCCGG GAGGGGCTCT GGCCCTCTTC
GCCCTCGGCA GGGCGGTCGG CTGGGTCGGG CACGCCATCG AGCAGTACGC GTCAGGAGCC
CCCATCCGGC CCCGGGCCCG CTACGTGGGC GAGCCGCCGC CTAGACCGGA ATCCGGACCA
TCTCCAGCCC GCTCAGGATG A
|
|---|
| Protein sequence | MEPGDRSGGR YLTAREAAEE LGVSVRTLYA YVSRGLVRSE AAGGGRRGRR YRAEDVRRLR
ERKEHRRDPA RAAEGALDWG MPVLESGISL IADGRLYYRG RDAVALSGER SLEQVAQLIW
TGSMAPGDRA AVPGLFRAAA RSVAGCPRLP LGGARPVLDE LGLALQAAAS RDPAAYDLRP
AAVVRTGARI LRLLVGAATG EQDAGETAAR ALQRRWVPRD EGAAEILDRA LVLCADHELN
VSSFTARCVA SAGATPYAAV VAGLAALGGV RHGGGTERVE AFLAEVEAAG DPREVVASRL
RRGEAVPGFG HRLYPEGDPR AAALLAALAE GYPGSEALGL AEGAAEAAGA LVGERPNVDF
ALAVLARVLG LPPGGALALF ALGRAVGWVG HAIEQYASGA PIRPRARYVG EPPPRPESGP
SPARSG
|
|---|
| |