| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2549 |
|---|
| Symbol | |
|---|
| ID | 4115380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2572303 |
|---|
| End bp | 2573718 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638037320 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_645278 |
|---|
| Protein GI | 108805341 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGACA AGTTCGACCT GGTCATCATC GGCGGCGGCA ACGCGGGGTA CATCCCCGCC
ATCAGGGCCT CACAGCTCGG GATGAGCGTC GCCCTCGTGG AGCGGCGCGA GGGGGGGCAC
CTCGGGGGCA CCTGCCTGAA CCTCGGCTGC ATCCCCACCA AGGCGCTCCT GCAGACGGCG
GCCATGCTGC ACGACGCCCG CAACGGCGAG GAGTTCGGCG TAAAGGTGGG GGACGTGCGG
TTCGACTACC GGCAGGCCGC CAAGAGGCGG GACCAGGTGG TCAACCAGCT CCGCCGCGGG
GTAGCCGGCC TGATGAAGAA GAACAAGGTC TCCGTGTACA ACGGCACCGG CTCCTTCATC
CAGCCCAGGC GGATAAAGGT CGAGCTCAAT GACGGCGGCA CCGAGGAGCT CGAGGCCGAG
AACGTGCTCA TCGCCACCGG CAGCGCCGTG AACACCCTGC CCGGGCTGGA GTTCGACGGC
GAGAAGGTCA TCTCCAGCGA CGACGTGGTC ACCGAGAACG ACGGCTACCC GGAAAGCGTG
ATCATCCTCG GCAGCGGGGC GGTGGGGGTC GAGTTCGCCA GCATGTACAA CGACTTCGGC
ACCGAGGTGA CCATCGTCGA GATCCTGGAC CGGCTCGTCC CGCTGGAGGA CCCGGAGGTC
TCCGCCGAGC TCGAGAAGCA GTTCGAGGGG CGGGGCATCC GCTGCCTCAC GGGGACGAAG
GCCGACCCCG GGAGCCTGGA CAAGAGCGGC GACGGGGTGA AGATAAAGGT CGCCGGCGAG
GGCGGCGAGG AGACGCTCGA GGCCGAGAAG CTGCTCGTGG CGGTGGGCCG CAAGACCGTG
ACGGAGGAGC TCAACCTGGA GGCCACCTCC GTCAAGACCG ACGACCGGGG CATCATCCAG
GTGGACGAGT TCTACCGCAC CGACGAGCCG GGGGTGTACG CCGCCGGCGA CGTCATAGGG
GGCTACTGGC TCGCCCACGC GGCCGGGCAC GAGGGGATCG TGGCGGTCGA GCACATGGCG
GGCAAGGACC CGATGCCGCT GGACCAGAAC CTCATCCCCC GGGTCACCTT CTGCCGGCCC
GAGATAGCCT CCTTCGGGCT CAGCGAGGAG CAGGCCAGGG AGGAGGGGTA CGAGATCAAG
GTGGGCAAGT TCCCCTTCCG GGCCATCGGC AAGGCGCTCA TCGAGGGGGA GCCCAACGGC
TTCCTCAAGG TGGTCGCCGA CGCGGAGACC GACCTGATCC TGGGGATGCA CGCCATAGGC
CCGCACGTGA CCGAGCTGAT CGCGGAGGGG GTCTTCGCCA AGCTGGTGGA GGGCACCCCG
GAGGAGATCG GGATGGCCGT CCACGCCCAC CCCTCCCTGG CGGAGATAGT GGGCGAGGCC
GCCATGGCCG TGGACGGGCA CGCGATCCAC TTCTGA
|
|---|
| Protein sequence | MADKFDLVII GGGNAGYIPA IRASQLGMSV ALVERREGGH LGGTCLNLGC IPTKALLQTA
AMLHDARNGE EFGVKVGDVR FDYRQAAKRR DQVVNQLRRG VAGLMKKNKV SVYNGTGSFI
QPRRIKVELN DGGTEELEAE NVLIATGSAV NTLPGLEFDG EKVISSDDVV TENDGYPESV
IILGSGAVGV EFASMYNDFG TEVTIVEILD RLVPLEDPEV SAELEKQFEG RGIRCLTGTK
ADPGSLDKSG DGVKIKVAGE GGEETLEAEK LLVAVGRKTV TEELNLEATS VKTDDRGIIQ
VDEFYRTDEP GVYAAGDVIG GYWLAHAAGH EGIVAVEHMA GKDPMPLDQN LIPRVTFCRP
EIASFGLSEE QAREEGYEIK VGKFPFRAIG KALIEGEPNG FLKVVADAET DLILGMHAIG
PHVTELIAEG VFAKLVEGTP EEIGMAVHAH PSLAEIVGEA AMAVDGHAIH F
|
|---|
| |