| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2532 |
|---|
| Symbol | |
|---|
| ID | 4115592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2550099 |
|---|
| End bp | 2550851 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 638037303 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_645261 |
|---|
| Protein GI | 108805324 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.870757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCGC GGCGCATCAT AAGCCTCGTC CCCAGCCTCA CGGAGGCCCT CTTCGCCTTC
GGCGTGGGGG AGAGGGTGGT GGGCCGCACC CGCTACTGCA CCCAGCCGCC CCGCGCCGTC
CGCCGGGTGC CGAAGGTCGG CGGCACCAAG AAGGTGGACG TCGGGCGCGC CCTCGCCCTG
GAGCCGGACC TCGTCGTCGC CGTGCGGGAG GAGAACCGCC GCGAGGACGT GGAGGCGCTG
CGCCGGGCGG GGGTGCGGGT CTTCCTCGGC GCGCCCGCGA CGGTGGCGGG GGCGCTCGCG
ATGCTGAGGG AGCTGGCCTC GCTCGTGGGG GCGCCGCGGG CCGGGGACGT GCTCGGCCCC
ATCGAGCGGG TCTGCCGCAG GCTCGAGCGG AGCCCCGCGG CGCGGCCCCG GCGGGTCTTC
GTCCCCGTCT GGGAGAACCC CCTCATGACC GTCGGGGCCG ATACCTACGC GCACGACGTG
CTGCGGGTGT GCGGCGGGGA GAACGTCTTC GGGGACCGGG CGCGCTACCC GGAGGTCGCC
CCCGAGGAGG TGGAGCGCGT GCGGCCGGAG GTCGTGCTCC TCCCCGACGA GCCCTACCCC
TTCTCCGCCG CCGAGCTGCC CGAGTTCTAC GCGCTCGGCA TCCCCGCCGC CCGCGAGGAC
CGCATCTATC TCGTGGACGG CAAGCTGCTC ACCTGGTACG GGCCGCGGAT GGCGGGCAGC
CTCGCGCAGC TCGCGGCGCT GCTCAGGTCC TAG
|
|---|
| Protein sequence | MVPRRIISLV PSLTEALFAF GVGERVVGRT RYCTQPPRAV RRVPKVGGTK KVDVGRALAL
EPDLVVAVRE ENRREDVEAL RRAGVRVFLG APATVAGALA MLRELASLVG APRAGDVLGP
IERVCRRLER SPAARPRRVF VPVWENPLMT VGADTYAHDV LRVCGGENVF GDRARYPEVA
PEEVERVRPE VVLLPDEPYP FSAAELPEFY ALGIPAARED RIYLVDGKLL TWYGPRMAGS
LAQLAALLRS
|
|---|
| |