| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2404 |
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| Symbol | |
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| ID | 4115363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2415654 |
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| End bp | 2416673 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638037184 |
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| Product | transketolase, central region |
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| Protein accession | YP_645144 |
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| Protein GI | 108805207 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.232287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCA GGATAACCTT CATGCAGGCG ATAAACGAGG CGCTCCGGCA GGAGATGGAG
CGCGACGAGA CCGTGGTGGT CTTCGGGGAG GACAACGCCG GCGGCGCGGG GGCACCGGGC
GAGGACGACG CCTGGGGCGG CGTCATGGGC GTCACCAAGG GTCTCTACCC CTCCTTCCCC
GGCCGCGTGC TCGACACCCC GATAAGCGAG TCGGCGTTTA TCGGGGCGGC GGCGGGGGCG
GCGTGCTCGG GGCTGAGGCC GGTCGCCGAG CTGATGTTCG TGGACTTCAT GGGGGTCTGC
TTCGACCAGA TCTTCAACCA GGCCGCCAAG TTCCGCTACA TGTTCGGCGG CAAGGCCAAG
ACCCCGATGG TCATAAGAAC GATGTACGGG GCGGGCATCC GGGCCGCGAG CCAGCACTCC
CAGAGCCTCT ACCCCATCTT CACGCACATC CCCGGCCTGA AGGTCGTGGT GCCGTCGAAC
CCCTACGACG CCAAGGGGCT CATGATCGCC TCGATCCGGG ACGACGACCC CGTGATCTTC
TTCGAGAACA AGGTGCTCTA CCAGATGGAG GGCGAGGTCC CCGAGGAGCC CTACGCGATC
CCCCTGGGCG AGGCCGAGTA CGTGCGCGAG GGCGAGGACG TCACGATAGT CGCCATAGGC
CGCATGGTCT CCATGGCCGA GCAGGCCGCC GAGGCGCTCG CGGACGAGGG CATCGAGTGC
GAGATCATCG ACCCCCGCAC CACCTCGCCG CTGGACACCG AGACGGTCTT CGAGTCGGTG
GAGAACACGG GAAGGCTCGT GGTCGTGGAC GAGTCCAACC CGCGTTGCAG CCTCGCCGCG
GACATCTGCG CCCTGGTCGC CCAGGAGCGC TTCGAAGACC TGAAGGCCGC GCCGAAGATG
GTGACCGCCC CCCACACCCC GCCGCCCTTC AGCCCGGCCC TCGAGGACCT CTACGTGCCG
GACCCGGAGC GGATAGCCGC CGCCGTGCGC GAGGTCGCCG GCGCGGGCGC CCGGGCGTAA
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| Protein sequence | MARRITFMQA INEALRQEME RDETVVVFGE DNAGGAGAPG EDDAWGGVMG VTKGLYPSFP
GRVLDTPISE SAFIGAAAGA ACSGLRPVAE LMFVDFMGVC FDQIFNQAAK FRYMFGGKAK
TPMVIRTMYG AGIRAASQHS QSLYPIFTHI PGLKVVVPSN PYDAKGLMIA SIRDDDPVIF
FENKVLYQME GEVPEEPYAI PLGEAEYVRE GEDVTIVAIG RMVSMAEQAA EALADEGIEC
EIIDPRTTSP LDTETVFESV ENTGRLVVVD ESNPRCSLAA DICALVAQER FEDLKAAPKM
VTAPHTPPPF SPALEDLYVP DPERIAAAVR EVAGAGARA
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