Gene Rxyl_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2280 
Symbol 
ID4117500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2292437 
End bp2292835 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID638037059 
Productendoribonuclease L-PSP 
Protein accessionYP_645022 
Protein GI108805085 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGGC TGCAACCGCC GGGTTGGGCG CGACCGAGAG GCTACGCCAA CGGCATCGCA 
GCCTCCGGAA GGCTGGTGTT CGTGGCCGGT CAGGTGGGCT GGGACGAGAC GGAGACTTTC
CGCACCCGAG ACTTCGTCGG CCAGGTGCGC CAGGCGCTGC TAAACACGCT GGCGGTGCTG
GCCGAGGCCG GAGCGGGCCC CGAGCACATC GTACGCATGA CCTGGTACAT CACCGACCGC
GAGGAGTACC TCTCCAACCT GGAAGGCATG GGGAGGGTCT ACCGGGAGGT GATGGGCAAG
CACTTCCCGG CGATGTCCAT GGTGCAGGTG GCGGCGCTCA TCGAGGAGGA GGCGAAGGTC
GAGGTGGAGA CCACCGCCGT GATCCCGGAA GAAGACTGA
 
Protein sequence
MERLQPPGWA RPRGYANGIA ASGRLVFVAG QVGWDETETF RTRDFVGQVR QALLNTLAVL 
AEAGAGPEHI VRMTWYITDR EEYLSNLEGM GRVYREVMGK HFPAMSMVQV AALIEEEAKV
EVETTAVIPE ED