Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2260 |
Symbol | |
ID | 4115203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2271834 |
End bp | 2272532 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638037039 |
Product | GntR family transcriptional regulator |
Protein accession | YP_645002 |
Protein GI | 108805065 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0845736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTTTAA AGGAACTGGC TGAGAACGCA TCGAAAGGGC ATCGGACGGC TCAGGAGATG GTCGCCGACG GCCTGCGGGA GGGAATACTA CGGGGGGTGC TGAAGGCGGG GCAACCGCTG AGGCAGATGG AGATCGCCGA GCAGTTTGGG GTGAGCAGCA TCCCGGTGCG AGAAGCTTTG AGGCAGCTGG AGGGGGAGGG GCTCATGGTC TTCTATCCTC GGCGGGGGGC GGTCGTGTCC GAACTCTCGC GGGATGAGGT GCTGGAGATC TGCGAGATGC GCGAGGTTCT GGAGCTGCTG GCGCTCAGGA AGGCTTTCCC CAATCTCACC GAGGGGGACC TACAGCGGGC GGAGGAGGTT CTGGAGCGGG CAGACGCGCA GACCGACGAG GAGCTTCTCG GTATGTGGGG GGAGGTAAAC TGGGAATTCC ACTCCGCTTT GTACCGGCCA GCGAACAGGC CCCAGCTGCT CGGGGTTATC AGGAACTTGC ACAACAGGTT CGACAGGTAC CTGCGCATCC ACTTCTCTGC GCTGGACTAC AGGGTCAAGG GGCAGCAGGA GCACTGGGAG ATCCTCGAGC GCTGCAAACG TGGGGACGAG GGGAGAGCCC TTGAGGAGCT ACGCCGACAC ATCCTGACTG TAAAGGAGAT GCTGCTCGAG TACCTGGACG GGGAGGCGGA GGAGGATGAT GCTCCTTGA
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Protein sequence | MSLKELAENA SKGHRTAQEM VADGLREGIL RGVLKAGQPL RQMEIAEQFG VSSIPVREAL RQLEGEGLMV FYPRRGAVVS ELSRDEVLEI CEMREVLELL ALRKAFPNLT EGDLQRAEEV LERADAQTDE ELLGMWGEVN WEFHSALYRP ANRPQLLGVI RNLHNRFDRY LRIHFSALDY RVKGQQEHWE ILERCKRGDE GRALEELRRH ILTVKEMLLE YLDGEAEEDD AP
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