Gene Rxyl_2229 details

Gene Information

• Locus tag: Rxyl_2229
• ID: 4115181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 2238225
• End bp: 2238920
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638037017
• Product: HhH-GPD
• Protein accession: YP_644980
• Protein GI: 108805043
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1194] A/G-specific DNA glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.202454
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCCTG CCACCTGCAT GAGGCCCGAG GATCGTTCAA GGATCGCCGC TTCTCTCGCG 
GCGCTCGGCA TAGAACGCGG CTACTCCTAC CCTTGGCACC GTGCCGAGGA ACCGTTCAGA 
GTGTTGCTCG CCGAATACCT CCTGAGACGG ACGACGCGTA AGGTCGTGGC GCGGGTGTAC 
GAGAGGGTGC TCAGCCGCTA TCCGAGCGCT GCCGCCCTGG CAACAGCGAG GGACGAAGAC 
CTATGGGCGG TAGCTCGAGA GGCCGGCCTG AGGCGGCGCA CCTTGCAGCT CATCGAGATC 
GCCAGGCAGA TAGTGCAGCA AGGTGGGGTG CAACCTAGCA GAGAGCGCTT GCTGGACTTA 
CCTTTTGTGG GTCCCTACAT AGCCGACGCG GTGCTTCTGT ACTCGTTCAA TGAGAGGGTG 
TTCCCGCTAG ACAATAATGT ACAGCGAGTC TTGTACAGGG TGATGCAGGG GACACATCCG 
CCCAAGAGCA TGGATCCCTA CAGAGACAAG GCCTTGGAGC AAATTGCCGA TGTTCTGACA 
AAGAACCTTG ACGCTGTGCG GCTTCGTCAC CTCCACCAGG GGATACTAGT GGTCGCTTGG 
GAGGTTTGTA GGGCAGCCCC TATTTGTCGG GCCTGCACTC TACGTACCCT CTGCCTCTAC 
TCGACACAGT CGGATGTCCC GGCTAGCCTG CGCTGA 

 

Protein sequence

MSPATCMRPE DRSRIAASLA ALGIERGYSY PWHRAEEPFR VLLAEYLLRR TTRKVVARVY 
ERVLSRYPSA AALATARDED LWAVAREAGL RRRTLQLIEI ARQIVQQGGV QPSRERLLDL 
PFVGPYIADA VLLYSFNERV FPLDNNVQRV LYRVMQGTHP PKSMDPYRDK ALEQIADVLT 
KNLDAVRLRH LHQGILVVAW EVCRAAPICR ACTLRTLCLY STQSDVPASL R