| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2204 |
|---|
| Symbol | |
|---|
| ID | 4117437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2217817 |
|---|
| End bp | 2218581 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638036995 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_644959 |
|---|
| Protein GI | 108805022 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2324] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.537082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCC TGCGCCCCTG CACGCTCCTG CTGCCGGTCG CCGCGCTGCT GTTTTTCTGC
GCGGCGGGCT TCGCCGTGCG CTTCCCCGAC CCGCCGGGCG CCTGGCTCCT CTCGCTCGCC
GCGGTAGCGG CGATCGCCGC TCCTCCCCTG GCGGCGCTCC TGCGGCTCTT CGGCCCCGCG
CGCTGGCTCG CGGCCCTGGC CCTGCTCTCG GCCTTCGCCT TCGCCGTGGA GTCGCTCGGG
GTCGCCACCG GCTGGCCCTA CGGCCGGTTC TACTACGGCG AGGGTCTCGG GCCGCTCCTG
GGCGGCCTCG TACCCTACCT GCTCCCCGTC TCCTACGTCC CGCTCGTCGT CGGGGCTGTG
GCCGCGGCCC GCCACCCCCG CAGCCGCCCT CTCTGGACCC TCCGCTCCGC CGCGCTCCTC
ACCCTGATCG ACGGCGTGCT CGACCCCGGC GCCGCCCTGC TCGGGTTCTG GGTGTGGCCC
GGGGGCGGCC CCTACTACGG CGTCCCGGCG AGCAACTACC TGGGCTGGCT GCTCTCGGGC
GCCGTCTCCT CGGCCGTCCT CGTCCTCCTC TGGCCCCGCG GCTCCCCCGC TCCCCCCGCC
CTGCTCGACG GCACCCTCCT CGCCCTCGCC TTCTGGACCG GGGTCGCGGC CTTCGGGGGG
CTCGCCCTCC CCGCCGCCCT GGGGGTCGCC CTCCTCGCGG CGTTTCTGGC GCGCCGCGCT
GGAATCCGGG GCTGCGCCCG TGTTACTTTT TTAAAGAAAA ATTAA
|
|---|
| Protein sequence | MAALRPCTLL LPVAALLFFC AAGFAVRFPD PPGAWLLSLA AVAAIAAPPL AALLRLFGPA
RWLAALALLS AFAFAVESLG VATGWPYGRF YYGEGLGPLL GGLVPYLLPV SYVPLVVGAV
AAARHPRSRP LWTLRSAALL TLIDGVLDPG AALLGFWVWP GGGPYYGVPA SNYLGWLLSG
AVSSAVLVLL WPRGSPAPPA LLDGTLLALA FWTGVAAFGG LALPAALGVA LLAAFLARRA
GIRGCARVTF LKKN
|
|---|
| |