Gene Rxyl_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2154 
Symbol 
ID4114808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2167374 
End bp2168009 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content73% 
IMG OID638036940 
Product50S ribosomal protein L4P 
Protein accessionYP_644910 
Protein GI108804973 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0120405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG CGCAGGTGTT CGACGCCCGC ACCGGCCGGA GGTCCGAGAT GGAGCTGAAG 
GGGCCCCGGT TCGAGACGGA GCCCAAGCAG CACGTCATAC ACCGGGCCGT GGTCGCCGAG 
CTGGAGGCCC GCAGGCGCTG GACCGCCTCC ACCCGGGAGC GCAGCGAGGT GGCCGGCTCG 
GGGGCCAAGC TCTACCGGCA GAAGGGGACG GGCCGGGCCC GGGCGGGCGA CATAAAGTCG 
CCGCTGCGTC ACGGCGGCGG CACCTGGGGC GGTCCGAAGC CCAAGGGGCC GCGCTACGGG 
AAGAAGATAA ACCGCAAGGA GGCGCGCGCG GCCTTCGACG GGGCGCTCTC TGCCAAGGCG 
GCCGAGGGCC GGCTGTACGT GCTCGACGCG CTGGACTTCG AGAGGCCCTC GACCAAGCGG 
GCCAAGGAGC TGCTCGGGCA GATGGGGGTC GAGGGGCCGG TGCTCCTGGT CCTCGACGGC 
GAGGAGCGCG AGGCGGCGCT CTCGTTCAGG AACCTGCCCG AGGTCACCGT CGTCGGGCCG 
CGCGGTTACG GGGTCTACGA GCTGCTGCGG GCCCGGGAGG TCGTCTTCTC CCGCGCGGCC 
TACGGCAGGC TCACCGCTGG CCGGGAGGAG GGTTGA
 
Protein sequence
MAQAQVFDAR TGRRSEMELK GPRFETEPKQ HVIHRAVVAE LEARRRWTAS TRERSEVAGS 
GAKLYRQKGT GRARAGDIKS PLRHGGGTWG GPKPKGPRYG KKINRKEARA AFDGALSAKA 
AEGRLYVLDA LDFERPSTKR AKELLGQMGV EGPVLLVLDG EEREAALSFR NLPEVTVVGP 
RGYGVYELLR AREVVFSRAA YGRLTAGREE G