| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2123 |
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| Symbol | |
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| ID | 4114719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2150688 |
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| End bp | 2151461 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638036909 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_644879 |
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| Protein GI | 108804942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.521479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCTCG CCGGGCTCGT CGAGTACGAC GGCGCGGGCT TCTCCGGCTG GGCCCGCCAG
CCGGGGCGTC GGACGGTCGA GGGGGAGCTC TCCCGGGCGC TCGAGACCGT CCTGCGCCAC
CCGGTGCGGC TCACGGCGGC GGGCAGGACC GACGCCGGGG TGCACGCCAG CGGGCAGGTC
GTCTCCTTCG ACGCGCGCGA CGGCACCGAC CCCGGGACCC TCGCCTACAA GGCGAGCGCC
GTGCTTTCGG AGGACGTGGC CCTGCGCCGG TGCGTGGCGG CTCCCCCGGG CTTCGACGCC
CGCCGCGACG CCGCGAGCCG CAGCTACGAG TACCGGATCG TCAACGCCCC GGTGCGGTCC
CCGCTGCGCC GCCGCCGGGC GGTGCACGTG GGGTACCGCC TGGACGAGCG GCTTCTCGGG
GAGGCCGCCC GGCGGGTGCT CGGGGTGCAC GACTTCCGCG CCTTCACCCC CGCCAAGAGC
CACCACGTGC GCTTCGAGCG CGCGGTGAGC GAGTCGCGGT GGGAGAGGTG CGGGGACCTG
CTCGTCTACA GGATCACCGC GGACGCCTTT CTGTACAACA TGGTGCGGGC TCTGGTGGGG
ACCATGCTCG AGGTGGCGCG GGGACGGCGG GATCTGGCAT CCTTTGAGGA GCTGCTCGGG
GGGGCCCGGC GCGCCGAGGG GGGGCCCACC GCCCCGGCGC GGGGCCTCAC GCTCGTGCGG
GTGCGCTACG CCGTGGAGGA GGTGGAGGAG GGGCTGTGGA CGCCGGGTTG CTGA
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| Protein sequence | MRLAGLVEYD GAGFSGWARQ PGRRTVEGEL SRALETVLRH PVRLTAAGRT DAGVHASGQV
VSFDARDGTD PGTLAYKASA VLSEDVALRR CVAAPPGFDA RRDAASRSYE YRIVNAPVRS
PLRRRRAVHV GYRLDERLLG EAARRVLGVH DFRAFTPAKS HHVRFERAVS ESRWERCGDL
LVYRITADAF LYNMVRALVG TMLEVARGRR DLASFEELLG GARRAEGGPT APARGLTLVR
VRYAVEEVEE GLWTPGC
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