| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2044 |
|---|
| Symbol | |
|---|
| ID | 4115854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2070915 |
|---|
| End bp | 2071490 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 638036831 |
|---|
| Product | nuclease (SNase-like) |
|---|
| Protein accession | YP_644801 |
|---|
| Protein GI | 108804864 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATGCCC GGCGGGGGCG CTATGATCCC CGGGTGCGCT CCGCCCGCGC AAGGGTGCTC
CTCCTCCTGC TCGTCCTGCT AGGGGCGGGC GGGTGCGCCG CGCCCCCCGG CGGGAGCCTC
CCGGAGAGGG AGGCCGTCGT GTCGCGGGTG ATCGACGGGG ACACCGTCGA GGTCTCGCCC
CCGGTGCGGG GGGAGGAGGA CGTGCGGCTC ATCGGGGTGG ACGCCCCGGA GCTGGGCGGC
CCCGGGGGCC CGCAGCCCTA CGCCCGCCGG GCCGCGGCCT TCGCCGAGCG GCGGCTGGAG
GGCCGGCGGG TGCGGCTGCA GTTCGGGCCC GAGCTGGAGG ACCGCTACGG CCGCGTGCTG
GCCTACGTCT ACGCGGGGGG AGGGATGTTC AACCGCCGGC TCCTCGAGAG GGGATACGCG
CAGCTTGCCC TCTTCCCGCC CAACACGCGT TACGCTGCCA GCCTGCGGCG GGCGCAGGAA
GAGGCCCGGG AGGCCCGGCG CGGGCTATGG GGGCTCCCGC CGGGGAGGCT CTGCCGCCTC
GCCGACCGGG GCAACGGCAT AGGCGGCGGC TGCTAG
|
|---|
| Protein sequence | MHARRGRYDP RVRSARARVL LLLLVLLGAG GCAAPPGGSL PEREAVVSRV IDGDTVEVSP
PVRGEEDVRL IGVDAPELGG PGGPQPYARR AAAFAERRLE GRRVRLQFGP ELEDRYGRVL
AYVYAGGGMF NRRLLERGYA QLALFPPNTR YAASLRRAQE EAREARRGLW GLPPGRLCRL
ADRGNGIGGG C
|
|---|
| |