Gene Rxyl_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1962 
Symbol 
ID4115754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1983548 
End bp1984159 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content77% 
IMG OID638036748 
Productthymidylate kinase 
Protein accessionYP_644721 
Protein GI108804784 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.113486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTGG AGGGGCTGGA CTTCTGCGGC AAGTCCACCC TGGCGCGGCT TCTGGAGGGG 
GAGCTCGGGG GCTGGCGGGT GCGCTTCACC CGCGAGCCGG GCGGCACCCC GGCCGCCGAG 
CGCATCCGGG GGGTGCTGCT GGACCCGCGG GGAGCTATGG ACCCCTGGAC CGAGGCCTAC 
CTGTACGCCG CCGCCCGGGC GGACCACGTG CGGCGCCTGA TCCTTCCCTC CCTCGAGCGG 
GGCGAGACCG TGGTCTGCGA GCGCTTCCTG GACTCCAGCC TCGCCTACCA GGGCCGCGGC 
CGCGGGCTCG GGATGGAGGC CGTCCGGCGG CTCAACGCCT GGGCCGTGGG GGATCTCGCG 
CCCGACGCGA CCTTCTACCT CCGGGTGGGG GCGGAGGAGC GCGCGCGCCG GGCCCGGGCC 
TCCGGCGCGC CGCCGGACAG GATAGAGCGC TCCGGCGGCG CCTTCATGCG CCGGGTCGAG 
GAGGGGTTCG AGGAGCTCGC CCGCCGCGAG CCCGGGCGGG TCCGCGTCCT CGACGGCACC 
CTGCCGCCCC GGGAGCTGGC CGCCCTCGTG GCTGGAGAGC TCCGCGCCCT CGGGTATACT 
CGCGGGGGTT GA
 
Protein sequence
MTVEGLDFCG KSTLARLLEG ELGGWRVRFT REPGGTPAAE RIRGVLLDPR GAMDPWTEAY 
LYAAARADHV RRLILPSLER GETVVCERFL DSSLAYQGRG RGLGMEAVRR LNAWAVGDLA 
PDATFYLRVG AEERARRARA SGAPPDRIER SGGAFMRRVE EGFEELARRE PGRVRVLDGT 
LPPRELAALV AGELRALGYT RGG