Gene Rxyl_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1951 
Symbol 
ID4115743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1972914 
End bp1973711 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content76% 
IMG OID638036737 
Productformyl transferase-like protein 
Protein accessionYP_644710 
Protein GI108804773 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.311505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTGG CCTTCTTCAC CAGCGACCGG TCTTTTCGCA ACGAGGTCTT CCGCTACATG 
TACGCCCACG TCGCGCACGC CTGCGGCGGG GCCCAGGTCG TCGCCGTCCG CCGACCCGGC
AGGCCCCCCG GCGGCCCCCT CGGCCGGGCG AAAAAGAAGC TGCGGGCCGG GGCGGGCCTG
CTCGGCACGC TGGAGCTCGC CGCCTCCTAC CCCCTGCAGC GGACGCTCGG GCGCAGGAAC
GACCGGCTGG CGCTCGAGGC CGTGGGCGCC CTCCCGCGGC CGCCCGCGGA GCCCCGCCCG
GAGGAGGCCC TCTACGTGGA GGCGGTAAAC GGCCCCGACG CGGCCGCGGC GCTGGAGGGG
CTGGCACCCG ACGCGGTCGT CCAGTTCGAC GCGGGCATCC TCCGGCCCCG CATCTTCCGC
ATCCCCCCTC TCGGGACGCT GAACCTCCAC CCGGGCATAG CCCCCCTGAT CCGGGGCCGC
GACCCGATCT ACTGGGCGCT CTGGGAGCGC GAGCCCGGGT GGCTGGGGGC CACCATCCAC
TACATCGACG CGGGCATAGA CACCGGCCCG GTCCTGGCCT ACGCGCCGGT CGAGCCCGCC
CCCGGCGACG ACTACCCGAG GCTCTTCGCC CGGGTCTACG AGGCCGGGGT GGCGCAGCTG
GTGTCCGTCC TGGACAGGCT CGGGGAGGGC GAGCGGTGGA GCGTGGAGCC GGCGCGGGGC
CGCAGCGTCT ACCGCACCAC GTTCCCCGGG TGGCGCCTCG CCCTGCTCCG CGGAGCCCCC
GTCCCCGCTC CGGGATGA
 
Protein sequence
MRVAFFTSDR SFRNEVFRYM YAHVAHACGG AQVVAVRRPG RPPGGPLGRA KKKLRAGAGL 
LGTLELAASY PLQRTLGRRN DRLALEAVGA LPRPPAEPRP EEALYVEAVN GPDAAAALEG
LAPDAVVQFD AGILRPRIFR IPPLGTLNLH PGIAPLIRGR DPIYWALWER EPGWLGATIH
YIDAGIDTGP VLAYAPVEPA PGDDYPRLFA RVYEAGVAQL VSVLDRLGEG ERWSVEPARG
RSVYRTTFPG WRLALLRGAP VPAPG