Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1935 |
Symbol | |
ID | 4115785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1956607 |
End bp | 1957683 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638036721 |
Product | hypothetical protein |
Protein accession | YP_644694 |
Protein GI | 108804757 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0151604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCCAA AGCACGCAGC TCACCCCAAG ACGCTGCGCA ATACGGTTTT GCTGGCAACC CTGCTCCTTC TTATCCTGTC CTGGGGCGAC ATGAGCCGGG GCGCCGGAGC GAAGGGCACC TGCACGCTGT ATGCCTCACC GGAGGGCTCC GAGGGCGCAA GCGGCAGCAT AGAAGACCCC TTCCCCTCCG TCCAGCGCCT CGCAGACTCC CTCAGCCCAG GCCAGACCGG TTGCCTCCTC AAGGGAACCT ACAGAGAGCC CGATGCGCTC CTCAGGATCG GCGCTCCCGG CATAACCCTG CGCAGCGCCC CCGGAGCGCG GGCCGAGGTA GAAGCGCGCG TCTACCTGCC CAGGGGCTCC GACGGCGTCA CCCTGCGCAA GCTCAACATC GACGGATCGC CAAACCCGCT GCCCAGCATT ACGGTAAACG CCAGGGGCGT GCGCCTGATC AACAACAACA TCACAAACCA CAACTCCACC ATCTGCATCA GCCTCGGCAA CCCCAGATGG GGTCTGGCCT CCAACACCCT CATCAAGCAC AACCGCATCC ACCACTGCGG CAAGCTCCCC CCAACAAACC ACCACCACGG CATCTACATC GGATACGCCA CACACACAAA GGTCATCGCC AACCTCATCT ACAAAAACGC CGACAGAGGC ATCCAGCTCT ACCCCAACGC CCAAAACTCC ACCATACAGG GCAACATCAT CGACGCCAAC GGCGAGGGCA TCCTCTTCTC CGGGCTCAGA GAGCACTCCT CCTCGGGCAA CCTTCTCGAA AACAACATCA TCTCCAACTC CAGGGTGCGC TGGAACGTGG CTGCAAACTG GAGGCGGGCG CAGGCTCCCG GCACGGACAA CCTCCTCTCC AGAAACTGCC TCTGGGCGTC CAACCCGGAT CCCTACTACC GGAAAGACGG CGGCGTGACC TCCGGGCGGC CCGGCTTTAC GGCTACCCGC AACCTGATCG CCAAACCGCT CTACGCCGCG CCTGGGCGGG GAGACTACAG GCTCCGCGAA GACAGCCCGT GCCGGGAGAT CCTCGGAACC TGGACGCCGT ACGCTAACGC CGGTTAG
|
Protein sequence | MEPKHAAHPK TLRNTVLLAT LLLLILSWGD MSRGAGAKGT CTLYASPEGS EGASGSIEDP FPSVQRLADS LSPGQTGCLL KGTYREPDAL LRIGAPGITL RSAPGARAEV EARVYLPRGS DGVTLRKLNI DGSPNPLPSI TVNARGVRLI NNNITNHNST ICISLGNPRW GLASNTLIKH NRIHHCGKLP PTNHHHGIYI GYATHTKVIA NLIYKNADRG IQLYPNAQNS TIQGNIIDAN GEGILFSGLR EHSSSGNLLE NNIISNSRVR WNVAANWRRA QAPGTDNLLS RNCLWASNPD PYYRKDGGVT SGRPGFTATR NLIAKPLYAA PGRGDYRLRE DSPCREILGT WTPYANAG
|
| |