| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1907 |
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| Symbol | |
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| ID | 4115582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1930754 |
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| End bp | 1932118 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638036692 |
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| Product | general substrate transporter |
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| Protein accession | YP_644666 |
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| Protein GI | 108804729 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0522136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATCAC GAGAACAAGT AGTGCCGCAG GTAGATCCAG CGCTTATACG CAGGAGCATT
ATCGGCGGCG CAGTAGGCGT TTGGGTGCAC TGGTTCGACT GGGCGGTCTA CGCCTACTTG
GCGACTACAC TCGCAGCTGT TTTCTTCCCC AATGAAAACC CCACAGCTGG CCTGCTCTCC
GTCTTCGCGA TCTTTGCTGT GTCGTTTGTC GTGCGGCCCT TGGGGGGATT CTTCTTCGGA
CCTTTGGGTG ACAAGATCGG AAGGCGGACC ACTTTAGCTG TGGTTATCAT TACCATGGGG
GCCGCCACCA CTGCAGTTGG TCTCTTGCCG ACCTACTCCT CGGTGGGCAT CCTGGCACCG
ATCCTACTTG TCACTGTGCG GCTCGTGCAG GGATTTGCTG CGGGAGGCGA GTTTGGAGGC
GCTGCTGCGT TTCTCGCGGA GTATTCGCCG AGAAGGCACA GGGGATTCGG GGTTAGTTGG
CTAGAGAGCT CAAGCCTCCT TGGATTCCTG ACGGCTTCCC TGGCAGTGTT TCTGCTAAAC
TCCGCCCTTA CGGAGGAGGC TGTGACTGCC TGGGGCTGGC GCATCCCCTT CTTGATCGCG
GGCCCTATGG CCGTTGTCGG GCTTTACATA CGACTAAAAC TCGAAGACAC CCCCAATTTC
AGGGTCCTGG AACAAACTAA CGAGGTTTCC CAAGCTCCCC TCCGAGAGCT GTTAAGGCAG
GACTGGAAAC AACTTCTCCA GATGACAGGG ATCGAGATTC TGCAGCACGT CAGCTTCTAC
ATTGTCTTAG TTTATCTACT TACCTACCAA ACGCAAGAGT TGGGTCTCTC GTCTGGATCC
GCTGCCATGC TCTCCACGAT CACCTCAATA GTAGCAATGG TTCTCGTCCC ACTCTTTGGT
GCTCTCTCCG ACCGTGTCGG TCGAAAGCCC CTATTGATAG CGTCAGGCTT GGGGTTTTTG
CTACTTTCCT ACCCTGCCTT TCTTCTCATG AGAACAGGCG ACTTGGGGGC CATTATCCTA
GTGCAGACGG GGCTTGGCAT TCTGCTGGCG CTCATCCTAA GTACGCATGC TGTCGCCATG
AGCGAGATTT TCCCCACGCG GGTGCGTCAA GCAGGTCTCT CACTCGGCTA TCAGGTGACC
GCCGCGATTT TCGCAGGAAC CGTACCGTAC CTGATGACGT ACTTGATCTC TGCGACTGGG
AATCCTTATG TACCGGCCTT TTACCTAATG TTTGTGGGCT TGGTGGGTGT CGGCACCACT
CTCACGCTGA GAGAAACCGC AGGCCTTCCC TTACCACAGA GAGAGCCTGT TACACCAGTA
CAGGAAACTG CCGGAGGTGC AGTTTCGGGT TCAGAGTCCG AGTAG
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| Protein sequence | MESREQVVPQ VDPALIRRSI IGGAVGVWVH WFDWAVYAYL ATTLAAVFFP NENPTAGLLS
VFAIFAVSFV VRPLGGFFFG PLGDKIGRRT TLAVVIITMG AATTAVGLLP TYSSVGILAP
ILLVTVRLVQ GFAAGGEFGG AAAFLAEYSP RRHRGFGVSW LESSSLLGFL TASLAVFLLN
SALTEEAVTA WGWRIPFLIA GPMAVVGLYI RLKLEDTPNF RVLEQTNEVS QAPLRELLRQ
DWKQLLQMTG IEILQHVSFY IVLVYLLTYQ TQELGLSSGS AAMLSTITSI VAMVLVPLFG
ALSDRVGRKP LLIASGLGFL LLSYPAFLLM RTGDLGAIIL VQTGLGILLA LILSTHAVAM
SEIFPTRVRQ AGLSLGYQVT AAIFAGTVPY LMTYLISATG NPYVPAFYLM FVGLVGVGTT
LTLRETAGLP LPQREPVTPV QETAGGAVSG SESE
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