Gene Rxyl_1711 details

Gene Information

• Locus tag: Rxyl_1711
• ID: 4116494
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1736704
• End bp: 1738665
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638036509
• Product: AMP-dependent synthetase and ligase
• Protein accession: YP_644483
• Protein GI: 108804546
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.103973
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCCAGG GAGACGGAGC CCACGAGATC CCCGGCATAG CAGAAGCCAG GCTCTACCCG 
CCGAACGACT TTCTGCGCGG CCAGCTGCCC TTCGCCGACC GGGCCGAGGC CGCGGCCTTC 
CTGGAGGAGG CCAGCAGCGA CCCCGACGGC TACTGGGCCG CCATCGCCTC CGAGCTGGAC 
TGGTTCACCG TCTGGGACAC CGTCCGCCAG GGGGAGCTGC CGGACTTCCG CTACTTCGTC 
GGCGGCACCT CCAACGTCAG CCACAACTGC CTCGACCGGC ACCTGGGGCT CGGCAGGCGC 
AACAAGGCGG CCCTGCTCTG GGAGTCGGAG GACGGCCGGC GCGAGGTGTG GACCTACCAG 
CAGCTCGCCG ACGAGGTTAA CCGCTTCGCC AACGTCCTCA GGGAGCTGGG GGTGGGACGG 
GGCGACGTCG TCGCCATCTA CATGGGGAAC ATCCCGGAGG TCTTCGTAAG CGTCCACGCC 
TGCTACCGGA TAGGTGCCCT CTACAGCATC ATCTTCGCCG GCTTCTCCAC CGACGCCGTG 
CGCCAGCGGC TCGAGGACGC CCGGCCGAAG GTCGTGGTCG TCGCCGACGC CACCTCCCGG 
CGCGGGCGCG AGGTGCCGCT CAAGCGGACG CTGGACCAGG CGCTCGCGGG CATCGACTCG 
GTAGAGACCG TGGTCGTGGT GCCCCGCGCC GGGGCGGAGA CGGAGCTGCG GGAGGGCCGG 
GACAGGCTCT ACGGGGACCT CGTCTCCCGC GCCGGCGCGT GGTGCCCGCC GGAGCCGATG 
GAGGCCAACG AGCCCGGGTT CATCATCTAC ACCAGCGGCA CCGAGTCCAG GCCCAAGGGC 
CTGGTCCACG CGGGCCTCGG CTTCCTCGTG GGGACCTACG CCGACGTCAA GTGGTCCATG 
AACCCGCAGG ACGACGACGT CTACTGGTGC ACGGCGGATG TGGGCTGGCT CACCTTCCCC 
ATCTGGTCGC TCGTCGGCGG GCTGGCGCAC GGGACGACGA TGGTCGTCTA CGAGGGCGCC 
CTCAACCACC CCGACCCGGG GCGCTTCTAC GAGATACTCG AGCGCTACCG GGTGAACAAG 
GTCTTCACCG CCCCCACGGC GCTCCGGATG CTGCGCGGGG CCGGGGAGCG GTGGCTCGAG 
GGCCGCGACC TCTCCGCCCT CAAGCTGGTC TCGCTCGTCG GCGAGCCCAT AGACCCAGAG 
ACCTGGCACT GGGTGCGTGA GGTCGTCGGG CGCGGGGAGG CGTTCGTGAA CAACACCTAC 
GGACAGACAG AGACCGCCAC CGGCTGGACC TCGGCCATCG TCGGCCTGAC CGGGGCGAAG 
CCGGGCTCCT GCGGCATCCC GCTGCCCGGC TACGTCTCCG AGGTGGTGGA CGAGGGGGGC 
AGGCCCGTGC CCCCCGGCAC GCCGGGCTAC CTCACCATCA CCGAGCCCTT CCCCTGCCTG 
GCCCGGACGG TCTGGGGCGA CCACCAGCGC TACCTCTCCA CGTACTTCGA GCGCTTCCCG 
GGCCGGTACT TCTCGGCCGA CGCCTGCGTG GTGGACCGCG ACGGCCACTA CTGGGTGACG 
GGGCGTGTGG ACGACGTCAT CAACGTGGCG GGCCACCGCC TGGGGACGAT GGAGATGGAG 
TCGGCGCTGC TGAACCACCC GGACGTGGCC GAGGCGGCGG TCATCGGGGT GCCGGATGCG 
ACGAAGGGGA CGGTGCCGGT GGCGTTCGCC CTGCTGCGCG CCGGGGCGGA ACCGCGCCCC 
GGGCTGCGCG AGGAGCTGGA GCAGCGGATC GTCGAGCGGG TAGGGTCCAT CGCCCGCCCG 
GCGGCGGTCC ACATCGTCAG CGCGCTCCCG AAGACGCGCA GCGGGAAGAT CATGCGCCGC 
CTGCTGCGCG AGCTGGTGAC GGAGGGCAGG GTGCGCGGGG ACACCACCGC GCTGGAGGAC 
CCCGAGTCGG TGAGCGTGCT GGAGAAGGAG CTCCCCCGCT AG 

 

Protein sequence

MVQGDGAHEI PGIAEARLYP PNDFLRGQLP FADRAEAAAF LEEASSDPDG YWAAIASELD 
WFTVWDTVRQ GELPDFRYFV GGTSNVSHNC LDRHLGLGRR NKAALLWESE DGRREVWTYQ 
QLADEVNRFA NVLRELGVGR GDVVAIYMGN IPEVFVSVHA CYRIGALYSI IFAGFSTDAV 
RQRLEDARPK VVVVADATSR RGREVPLKRT LDQALAGIDS VETVVVVPRA GAETELREGR 
DRLYGDLVSR AGAWCPPEPM EANEPGFIIY TSGTESRPKG LVHAGLGFLV GTYADVKWSM 
NPQDDDVYWC TADVGWLTFP IWSLVGGLAH GTTMVVYEGA LNHPDPGRFY EILERYRVNK 
VFTAPTALRM LRGAGERWLE GRDLSALKLV SLVGEPIDPE TWHWVREVVG RGEAFVNNTY 
GQTETATGWT SAIVGLTGAK PGSCGIPLPG YVSEVVDEGG RPVPPGTPGY LTITEPFPCL 
ARTVWGDHQR YLSTYFERFP GRYFSADACV VDRDGHYWVT GRVDDVINVA GHRLGTMEME 
SALLNHPDVA EAAVIGVPDA TKGTVPVAFA LLRAGAEPRP GLREELEQRI VERVGSIARP 
AAVHIVSALP KTRSGKIMRR LLRELVTEGR VRGDTTALED PESVSVLEKE LPR