Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1708 |
Symbol | |
ID | 4116491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1734873 |
End bp | 1735658 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638036506 |
Product | TM helix protein |
Protein accession | YP_644480 |
Protein GI | 108804543 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0232168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCGACC TTCTCGAGTA CGTGCCCCGG GCGCTCGGGG CGCTGCTCAT CGTGGTCGTG GGGTTCGTGC TGGGGCGGCT CGCCCGCCCG GCGACCACCT TCCTGCTGCG GCGGCTGCGC TTCGACAGCG CCTGCGACAG GATCGGGCTC ACCGCCTTGA TGCGCCAGGG CGGCATAAGG AGCAGCCCCT CCCAGTTCGC CGGGACGGTG GTCTTCTACG CCATCCTGCT CTTCTCGGTG CTCGCGGCGC TGGGCCCGCT CGGGCTGACC TTCCTCGCCG GCACCCTCAA CCAGGTCGTC CTGTACGCCC CGAGGGTGCT GGTGGCCGTC CTGATCCTCG TGCTCGGCAC CTCGGCCGCC GGCGTGCTCG GCCAGCTCAC CCGGCGGGCG CTCTCCGAGG CGGGGGTGAG GCGGACCGGC GGGATAGCCT CCGCCGTGCG CTTCGCGGTG ATCTTCGTGG CCGCGGTGCT CGCCGCGGGC GTGCTGGGTA TAGAGGCCAC CATCCTGATC GTGGTTACGG TGGTGGCGCT CGGCGGGGTG GTGCTGACGG CCTCCCTGGC GCTGGGGCTG GGCCTCAGGC GCATCTCGGA GAACGTCGCC GCCAAGCGCT ACATCACGGA AGGCATCGCG GAGGGCGACG AGATAAGCGT GGGGGGCGTC TCGGGCCGGG TGGAGCGGAT AGGCTACGCG ATGACGACCC TGCGCGACCC CGCGAGCGGG AGGGTCTACC TGATCCCGAA CTCGCGCTTT CTCGAGCATA CGGTGGAGAA GGCGCCGGAG GAGTGA
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Protein sequence | MSDLLEYVPR ALGALLIVVV GFVLGRLARP ATTFLLRRLR FDSACDRIGL TALMRQGGIR SSPSQFAGTV VFYAILLFSV LAALGPLGLT FLAGTLNQVV LYAPRVLVAV LILVLGTSAA GVLGQLTRRA LSEAGVRRTG GIASAVRFAV IFVAAVLAAG VLGIEATILI VVTVVALGGV VLTASLALGL GLRRISENVA AKRYITEGIA EGDEISVGGV SGRVERIGYA MTTLRDPASG RVYLIPNSRF LEHTVEKAPE E
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