Gene Rxyl_1588 details

Gene Information

• Locus tag: Rxyl_1588
• ID: 4117034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1613308
• End bp: 1613769
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638036385
• Product: 3-dehydroquinate dehydratase
• Protein accession: YP_644362
• Protein GI: 108804425
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0757] 3-dehydroquinate dehydratase II
• TIGRFAM ID: [TIGR01088] 3-dehydroquinate dehydratase, type II

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCAGGG TATTCGTTCT CAACGGCGTA AATCTCGGCG CTCTCGGAGC GCGCCGTCCG 
GAGGTCTATG GGACGCTCAC GCTCGGGGAC ATAGAGCGGA GGCTGCGCGA GAGGTTCCCC 
GAGGTCGAAT TCGACTTCCG GCAGACGGAC CACGAGGGGG AGATGGTCGG CTTCGTGCGC 
GAGGCGAGGG AGAGCGACGG GGTAGTCATC AACCCCGGCG CCTGGACCCA CTACTCCTAC 
GCCCTCCACG ACGCCCTGGA GACGATCGAG GGGGTGCCCA AGGTGGAGGT CCACCTCTCC 
AACGTGCACG CCCGGGAGCC CTGGCGACGC CACTCCGTGA TCTCGCCCGC CGTGGACGCC 
GTGGTGGCCG GCATGGGTCC CTACGGCTAC GAGGCCGCCG TCGGCTATCT GCTGCGGGGG 
GCGGAGGCGC GGCGCGGTGA TCCCTCGGAG GTGAACCCAT GA 

 

Protein sequence

MVRVFVLNGV NLGALGARRP EVYGTLTLGD IERRLRERFP EVEFDFRQTD HEGEMVGFVR 
EARESDGVVI NPGAWTHYSY ALHDALETIE GVPKVEVHLS NVHAREPWRR HSVISPAVDA 
VVAGMGPYGY EAAVGYLLRG AEARRGDPSE VNP