Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1584 |
Symbol | |
ID | 4117030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1608548 |
End bp | 1609408 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638036381 |
Product | glutaconate CoA-transferase |
Protein accession | YP_644358 |
Protein GI | 108804421 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.803865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAAGC TGACCTCTCT AAACGAGGCG GTGTCGGAGC TGGTGCGCGA CGGCGATTCG GTCGCGCTGG AGGGCTTTAC GCACCTGATC CCCACCGCCG CCGCGCACGA GATCATCCGC CAGAAAAAGA GGGACCTCAC CCTCATCCGC ATGACCCCGG ACCTCATCTA CGACCAGCTG ATCGGGATGG GGTGCGCGCG AAAGCTCGTC TTCAGCTGGG GCGGCAACCC GGGCGTGGGG AGCCTGCACC GCTTCCGGGA CGCCGTGGAG AACGGCTGGC CGCAGCCCCT GGAGATAGAG GAGCACTCCC ACGCGGGGAT GGCCAACCGC TACGTGGCCG GGGCCTCGGG GCTGCCCTTC GCGGTCCTGA GGGGGTACAA GGGGACGGAC CTCCCGGAGG TGACCGCCAC GGTCGCCCCC ATAAGGTGCC CGTTCACCGG CGAGGAGCTC ATGGCCGTTC CCGCCCTCAA CCCCGACGTT GCCGTCATCC ACGCCCAGCA GGCCGACCGG CGGGGCAACG TCATCATCTG GGGCATCTCC GGCATCCAGA AGGAGGCGGC GCTCTCGGCG AGGCGGGTGA TCGTCACCGT GGAGGAGGTG GTGGAGAGCT TCGAGCCCGA GCCCTTCCAC GTCGTGATCC CCTCCGTGGC CGTGGACGCC GTCTGCGAGG TGCCGGGCGG TGCGTACCCC TCCTACGCGT ACGGCTACTA CGAGCGCGAC AACGCCTTCT ACGAGGCGTG GGACGGGATA AGCCGCGACC GCGAGCGCTT CCGGGGGTGG ATGGAGCGGC ACGTGCTGGG GGTGAGGGAC TTCGAGGAGC ATCTGAGGAG CATCAGCAAG GAAGAGGTGA TAAAGGCTTG A
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Protein sequence | MDKLTSLNEA VSELVRDGDS VALEGFTHLI PTAAAHEIIR QKKRDLTLIR MTPDLIYDQL IGMGCARKLV FSWGGNPGVG SLHRFRDAVE NGWPQPLEIE EHSHAGMANR YVAGASGLPF AVLRGYKGTD LPEVTATVAP IRCPFTGEEL MAVPALNPDV AVIHAQQADR RGNVIIWGIS GIQKEAALSA RRVIVTVEEV VESFEPEPFH VVIPSVAVDA VCEVPGGAYP SYAYGYYERD NAFYEAWDGI SRDRERFRGW MERHVLGVRD FEEHLRSISK EEVIKA
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