| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1570 |
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| Symbol | |
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| ID | 4116452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1594297 |
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| End bp | 1595112 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638036367 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_644344 |
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| Protein GI | 108804407 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.270435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGGCG CCATGGATCT TAGGGATATC CGCGGCTTCG TCTTCGACGT GGACGGGTCG
CTCGTGCACC GCGACGCCAC CTTCCGGGCA CGCCCCCTTC CGGGCGCGCC TGAGGTGCTG
AAGAGCATTC GCGCCTCGGG GCGCCCGCTC GTGCTCTTCA CCAACGGGAC GCACCTGCGC
CCCGAGGAGT TCGCGGAAGG GCTGCGCGAG GGCGGGCTTC CCGTCCGGGA CGACGAGGTT
CTGACGCCCG TCTGCAGCGC TCTGGGGTAC CTCTCCCGCC GGCGCAAGTC GGGGCGGGTG
ATGGTCTTCG GGTCCGGGAC CGTCCGCGAG CGCCTGCTGG AGGCCGGCGT GCGGCTCACG
GACGGCGAGG ATGCCGAGGT GGTCTTCGTC ACCCACGTAA ACGAGGTGGA TTTCGAAGCG
CTCGAGAGGG CGGCCCGGGC GATCACGCGC GGGGCGCGCC TTCTCACGGC GAACTACGGT
CCCGGCTACT GGGGATCGGA CGGCATGATC TTCAGCCGCG GCGCGATGCT GACGGCGGCG
CTGGCGAAGG CTACGGGCGC ACGTCCCGTG ATCGTCGGGA AGCCCTCGCG GCCCGCGGTG
CGCGCCATCT GCGACCGCCT CGGGTTGGAC TCGACGGAGA TAGCCGTGAT CGGAGACGAC
CTGGATATGG ACATCGCGCT GGGCCGGATG GGCGGGTCCC GGACCATCCT GGTCCGGAGC
GGCATCAGCG GCGCCCGCGA GCTGGACGGG GTGCCGGAGC GCCGGCGGCC GGACGCGGTG
GTGAACGTGG TGGGGGAGAT CCTGGAGTGG CTCTGA
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| Protein sequence | MSGAMDLRDI RGFVFDVDGS LVHRDATFRA RPLPGAPEVL KSIRASGRPL VLFTNGTHLR
PEEFAEGLRE GGLPVRDDEV LTPVCSALGY LSRRRKSGRV MVFGSGTVRE RLLEAGVRLT
DGEDAEVVFV THVNEVDFEA LERAARAITR GARLLTANYG PGYWGSDGMI FSRGAMLTAA
LAKATGARPV IVGKPSRPAV RAICDRLGLD STEIAVIGDD LDMDIALGRM GGSRTILVRS
GISGARELDG VPERRRPDAV VNVVGEILEW L
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