Gene Rxyl_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1509 
Symbol 
ID4117053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1527674 
End bp1528081 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID638036303 
Producthypothetical protein 
Protein accessionYP_644283 
Protein GI108804346 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.728436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCTTCC GCGTCGAGGT GCTGAACGAG ACCAGCGGCG GCGCACGGCT CACCCCCGAG 
CGCGCCACCG AGCTCTGCAG GCGGGCCTTC GTCGAGCGGG GGCTCGACCC CGAACGTATG
GGCGAGCTCT CGGTTGCGCT TGTCGAACCC GAGGTTATCC ATGATCTCAA CCTGAAGTTC
AGGAACAAGG ATGCCCCGAC GGATGTGTTG AGCTTTGAGG TGGACGGTCC TTACGGGGAG
ATGGTGGGGG AGATCGTGAT CTGCCCGGGG TGCGCCGAGA TGGACCTGGA GGAGCTGGTG
GTGCACGGGG CGCTCCACCT CTCCGGGATG GACCACGGGG AAAACTTCGA GGCGAGCGAG
ATGGCCCGGG TGCAAAAGCG GGTGATGGAG GCCGTACGTG GCCGGTAA
 
Protein sequence
MPFRVEVLNE TSGGARLTPE RATELCRRAF VERGLDPERM GELSVALVEP EVIHDLNLKF 
RNKDAPTDVL SFEVDGPYGE MVGEIVICPG CAEMDLEELV VHGALHLSGM DHGENFEASE
MARVQKRVME AVRGR