Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1505 |
Symbol | |
ID | 4117049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1524869 |
End bp | 1525576 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638036299 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_644279 |
Protein GI | 108804342 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00680706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCATGA GGGTGCGGGA GTTCGCGAAG ACCATAGACC ACACCCTTCT GCGCCCGGAC GCGACCGAGC AGGACATAGT GCGTTTGTGC GAGGAGGCGG CCCGCTACCA CTTTGCGGCG GTCTGCGTGC CGCCCTGCCA CGTCCGGCGG GCCGCGCGGG AGCTGCGCGG GGTGGACGTC AAGGTGGCCA CCGTGATCTC CTTTCCCTTC GGGGCCGACG TCACGCCGGT GAAGGCCGCC GCCGCCCGGG AGGCGATCTC CTCCGGCGCC TCCGAGCTGG ACGTGGTGAT GAACATCTCC AAGTTCCTCT CGGGGGACTT CAACTACGTC GCGGACGAGC TTCTGGCGAT CATGCAGGAG GTCGGTGTCG CGGCCATAAA CAACGGCCTG ACCGACGTGG TGGTCAAGGT GATCATCGAG ACCGCCTACC TCTCGGACAA GATGAAGCGG CTGGCCGCCC AGATAGTGGC CGCCAGCGGC GCCGACTTCA TCAAGACCTC GACCGGGTTC GCCCCCGCCG GGGCGACGGT GGAGGACGTC GCCCTGCTGC GGCAGGAGGC CCCGGACGCG CTGGCGGTGA AGGCCTCGGG CGGCATACGC ACTCTCCAGG ACGCCCTGGA CATGCTCAAC GCCGGCGCCT CCCGCCTGGG GATGAGCAGC AGCGTGGCCG TGATGAAGGA AGCGGAGAGT GGCGCTCTAC AGGAGTAG
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Protein sequence | MAMRVREFAK TIDHTLLRPD ATEQDIVRLC EEAARYHFAA VCVPPCHVRR AARELRGVDV KVATVISFPF GADVTPVKAA AAREAISSGA SELDVVMNIS KFLSGDFNYV ADELLAIMQE VGVAAINNGL TDVVVKVIIE TAYLSDKMKR LAAQIVAASG ADFIKTSTGF APAGATVEDV ALLRQEAPDA LAVKASGGIR TLQDALDMLN AGASRLGMSS SVAVMKEAES GALQE
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