Gene Rxyl_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1488 
Symbol 
ID4117012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1506488 
End bp1507252 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content76% 
IMG OID638036280 
Producthypothetical protein 
Protein accessionYP_644262 
Protein GI108804325 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.28808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCTGC AACGCTCGCA GATCCCGGCG CTCCCCGCCG GCGTCGCACT GCGCGGCCGG 
CGGGCGCTCT ACGTCGCCCC CGACCCGGAG CCCAGCGGCG CCAGGATATG GTTCTTCACC
CGCCTCGGCG GCGTCTCACG CCCGCCCTTC GACGCCCTGA ACGTCTCCCG CAAGGTGGGC
GATAGCGAGG AGGCGGTCGC CGAGAACCTC GCCCGGGCGC GCGAGGCCAT GGGCCGGAGG
CCCACCGCGT GGGTGCGCCA GGTCGCCGGT GATGGGGTGG TCGAGGTCTC GGAGGGCGGG
TGCGCCGGCG AGGCCGACGC GCTCATCACC TCCCGGCCCG GTCTCTGCCT CACCGTGGGG
GTCGCGGACT GCGCCCCGGT GGCGCTCGTC GGCGAGGGGC GCGTGGGGAT GGTCCACTCC
GGCTGGCGGG GGACGCTGGC CGGCATCTCC GGCAAGGCCG CCCGCAGGAT GGGCGTCCGG
GGCCTGACGG CGTACATCGG GCCCTGCATC CGGCAGTGCT GCTACGAGGT CTCGCCGGAG
CTCGCCGGCG AGTTCGCCCG GAGGTTCGGA GCGGGCGTCG TCTCCGGGAG GCAGCTCTCG
CTGCCCGAGG CGATCCGGCG GGATCTGCTG GAGGCCGGGG TGCGGGAGGT CGTGGACCTG
GGGCTGTGCA CCGGCTGCCG GCCGGAGTTC TTCTTCTCCC ACCGCAAGCA GAAGCCCGTG
ACCGGGCGCG GCCTCGCGGC GGTGGCCCGG GTGGAGGGGG CATGA
 
Protein sequence
MSLQRSQIPA LPAGVALRGR RALYVAPDPE PSGARIWFFT RLGGVSRPPF DALNVSRKVG 
DSEEAVAENL ARAREAMGRR PTAWVRQVAG DGVVEVSEGG CAGEADALIT SRPGLCLTVG
VADCAPVALV GEGRVGMVHS GWRGTLAGIS GKAARRMGVR GLTAYIGPCI RQCCYEVSPE
LAGEFARRFG AGVVSGRQLS LPEAIRRDLL EAGVREVVDL GLCTGCRPEF FFSHRKQKPV
TGRGLAAVAR VEGA