Gene Rxyl_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1433 
Symbol 
ID4117231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1456377 
End bp1457066 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID638036225 
ProductMerR family transcriptional regulator 
Protein accessionYP_644207 
Protein GI108804270 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0281208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACG GCGGCGGAAG CCCCAAGGAC CACTACACGA TAGGCGAGGT CGTAGAGCGG 
CTCAAGCCGG AGTTCCCCAC CCTCTCAGTG AGCAAGATAC GCTATCTGGA GCGGCGGCGG 
CTCATAAACC TGAACCGGAC GCGGGGGGGC TACCGGCTGT TCACCGAGCA GGACGTCGAG 
CTTTTGCGCT ACATACTGAA GCTGCAGGAG GAGGAGTACC TGCCGCTGAA GGTCATAAAG 
AAGAGGATCG AGGGCGGTGC GCCGCTCTCC TCGCTCTCCA AGGACTCGGC GGGCGACCTC 
TCCAGGGTGC TCGAGGAGAG GACGTACACG GCCGAGGAGC TCGCCGACTC CCTCGACGTG 
GAGGTGAGGT TCGTGGAGGA GTTGATCTCT GTGGGGGTCA TCGGGAGGGG CGGCGAGCTC 
ACCCAGCGGG ACAAGGAGAT AGCCCGGCTG GCGCTCGAGA TGGCCAAGTA CTCCATCCAG 
CCGCGGCACC TGCGGGGCAT AATGGCGGCC GTGGACCGGG AGGCGGCGCT CTTCAAGCAG 
GTGCTCAACC CCGAGTTGCG CAGCGGCGAC GAGAAGCGGG TTCAGGAGGC GATGGAGAAG 
GCCCGGCACC TCGCCGCGGT GGACTCGCGG ATGAAGGAGC TGATGATGGC CGGGGTGATA 
GAGAGCTTCG ACCCGCGCTC CTCGTCGTGA
 
Protein sequence
MDNGGGSPKD HYTIGEVVER LKPEFPTLSV SKIRYLERRR LINLNRTRGG YRLFTEQDVE 
LLRYILKLQE EEYLPLKVIK KRIEGGAPLS SLSKDSAGDL SRVLEERTYT AEELADSLDV 
EVRFVEELIS VGVIGRGGEL TQRDKEIARL ALEMAKYSIQ PRHLRGIMAA VDREAALFKQ 
VLNPELRSGD EKRVQEAMEK ARHLAAVDSR MKELMMAGVI ESFDPRSSS