| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1431 |
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| Symbol | |
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| ID | 4117229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1454913 |
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| End bp | 1455842 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638036223 |
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| Product | phage integrase |
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| Protein accession | YP_644205 |
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| Protein GI | 108804268 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.145363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGC GGCAGAGTAG CCCCCCCGCC CGCCCCGGCG ACGAAGAACG ACTCCTCTCC
CTCTACCTCC GTACCCTCTC CAGCCCTCAG ACCCAAAAAA CGTATAATAC AGAGATACGA
GCCTTCCTCT CCTACCTGAG AGAGAGGCTC GGGAAGAACC TGGGAGAGGT AACGGCCGAG
GACATCTCGC TGTACAGGGA GCACGTCACG GGGGCCTACG CCCCGGCCAC GGCGGCGAAG
AAGCTGACGG CGCTGAGGCG CTTTCTGACC TTCACTTACA TGGGCGGCAT CACGCGGGTA
AACCCGGAGG CGCTGAAGTT CTTCGCCAAG AGCCCGCGCG TGCGCCAGGA CCCCTCGTAC
AACATCCTCA CAGAGGAGGA GCTCTCGCGC ATGCTCTCGG CGGCGCGTGC GGACAACCCC
CGGGACCACG CTCTGCTGGC CGTGATGGCC GGGTGCGGGC TCAGGGAGGC CGAGGTCGTC
GGGCTGCGCG TCGGGGACTT CAGGGAGCAC GGGGACGCGG TGCTCCTGCG GGTTCGCGGC
AAGGGGGACA AGGTGCGAAA CGTGCCCGTC TCGCCCGAGC TCTGGCGCCT CGTGCAGCGC
TACGTGCTCT CCTCGGGGCG CAGCCTGAGC TCCCAGACGG ACGCCAGAAA GCCCCTTTTC
CCGTCGCGCG TCGGGAAGGA CCGGCCGCTG ACGACCCGCT CGATCCAGAA CATAGTCAAA
AAGTACGTCC GCGCCGCCGG CATAAACAAG CCCATCTCGC CGCACTCCAT ACGACACACC
GTGGGCACCA ACATGGCCAT GAACCAGGCA CCGCTCCTGG TCATACAGCA GTTCCTCGGC
CACTCGGACC CCAAGACCAC CATGCGCTAC ATACGCCGCG CCGAGGAGCT CGCCTCCAGA
GCCTACGAGT ACAACACCCT CCCCCTGTAG
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| Protein sequence | MTLRQSSPPA RPGDEERLLS LYLRTLSSPQ TQKTYNTEIR AFLSYLRERL GKNLGEVTAE
DISLYREHVT GAYAPATAAK KLTALRRFLT FTYMGGITRV NPEALKFFAK SPRVRQDPSY
NILTEEELSR MLSAARADNP RDHALLAVMA GCGLREAEVV GLRVGDFREH GDAVLLRVRG
KGDKVRNVPV SPELWRLVQR YVLSSGRSLS SQTDARKPLF PSRVGKDRPL TTRSIQNIVK
KYVRAAGINK PISPHSIRHT VGTNMAMNQA PLLVIQQFLG HSDPKTTMRY IRRAEELASR
AYEYNTLPL
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