| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1415 |
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| Symbol | |
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| ID | 4117271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1435993 |
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| End bp | 1436790 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638036207 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_644189 |
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| Protein GI | 108804252 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.334463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCGCC TGCTCCCCCG GCGGACGAAG GTGGGGCACA CCGGGACCCT GGACCCGCTG
GCCTCGGGGC TGCTCGTGCT CCTCGTGGGC CGGGCGACCC GGCTCTCGCG CTACGTTACC
GGGCTGGACA AGACCTACGT CGCCACGGCC CGCTTCGGGG CCGCCTCGGA CACCCTGGAC
GCCGACGGCG AGATCCTGGA GAACGCCGGC CCGGTGCCAG ACGAGGCGGA GCTGCGGCGG
GCGCTGCCCC GCTTTGTCGG CGAGATCCGG CAGCTCCCCC CCATGGCCTC GGCCGTGAGG
GTCGGGGGCC GGCGCCTCTA CGAGCTGCAC CGCCGCGGGG TCGAGGTGGA GCGCGAGCCG
CGCCTCGTCA GGGTCCACTC CCTCGAGCTC CTCTCCTTCG ACCCCCCCGC CGCCACCTTC
GCCGTCTCCT GCAGCAGCGG CACCTACGTC CGTACCCTGA TCTCCGACCT CGCCGCCTCC
CTCGGCACCG CCGCCTACCT CACCGCCCTG CGCAGGACCC GCGTCGGTCA CCTGCGCGTC
GAAGACGCCC TGCCCCCCCA AGACCTCGAC CCCTCCACCA TCCATCACCG CATAATACCC
CCTTCGGGGG TGCTGGCCCA CCTCCCCGCG GTGGAGGCCG ACGAGGGGCG GGCGCGGGCG
GTCGCCTCCG GGAGGGGACT GCGGGTTGCG GGCGGGCTTG AGGGGAGCTT CCGGGTCGAG
CGGGGCGGGG AGCTGCTTGC GGTCTACCGG GCCGAGGGCG GGCGGGCCCG GCCGGAGGTG
GTGCTGTGCG GGGGGTAG
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| Protein sequence | MKRLLPRRTK VGHTGTLDPL ASGLLVLLVG RATRLSRYVT GLDKTYVATA RFGAASDTLD
ADGEILENAG PVPDEAELRR ALPRFVGEIR QLPPMASAVR VGGRRLYELH RRGVEVEREP
RLVRVHSLEL LSFDPPAATF AVSCSSGTYV RTLISDLAAS LGTAAYLTAL RRTRVGHLRV
EDALPPQDLD PSTIHHRIIP PSGVLAHLPA VEADEGRARA VASGRGLRVA GGLEGSFRVE
RGGELLAVYR AEGGRARPEV VLCGG
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