| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1353 |
|---|
| Symbol | |
|---|
| ID | 4117172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1381382 |
|---|
| End bp | 1382551 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638036146 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_644128 |
|---|
| Protein GI | 108804191 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG AGAAGAGCGC AGTCTACCTG GACAACGCGG CCACCACCCC GCTGGACGGC
AGGGTGCTGG AGGCCATGCT GGAGAGCCTT GAGGGGCTGC GCGGCAACCC CTCCGCGCTG
CACGCCCCGG GCGCCGCGGC CCGCGAGGCG GTCGAGGAGG CCCGGGAGGC CGTGGCGGCG
CTGGTGGGCG CCTCCCCGGA GGAGATAGTC TTCACCTCCG GCGGGACGGA GGCGGACAAC
CTGGCCGTGC TGGGGCTGGC CCGGGCCGCC CCGCCCGGGA GGCGCCACGC CGTCATCTCG
CGCGTCGAGC ACCCGGCGGT GCGCGAGGCC GGGCGGCGCC TCGAGGCCGA GGGCTTCGAG
GTCACCTGGC TCGGCGTGGA CGGGGACGGG GTGGTGGACG CGGGGGCCTT CGAGGCGGCG
CTCCGGGAGG ACACCGCGCT CGCCGCGGTC ATGTGGGCCA ACAACGAGGT CGGGAGCGTC
CAGCCGGTGG AGGAGCTGGC CGCGGCTTGC GCGGAGAGGG GGATCCCCTT CCACGCCGAC
GCGGTGCAGG CCGCCGGGCG GCTGCCGGTG GACGTCCGCC GGGTGCCGGT GAGCACGCTG
GCCCTCTCCG CACACAAGCT CTACGGGCCG CAGGGGGCGG GCGCGCTCTA CGTGCGGGAG
GGGGTGGAGG TCTCCCCCCT GATCCTGGGC GGCGGCCAGG AGCGGGGGCT GCGCAGCGGC
ACCGAGAACG TGGCGGCCAT CTCGGGCTTC GGGGTCGCGG CCCGGCTCGC CGCCGGGGAG
CTGGAGGAGC GCGCCAGGCG CGAGCGGGAG CTCAGGGACA GGATCCTCGC CGGCGTCCGG
GAGATGGAGG GCGTGAGGCT GAACGGACAC CCGCGCCGCC GCCTCCCCAA CAACGTCCAC
CTCACGGTCG AGGGGGTGGA GGCCGAGGGG CTCGTGCTCT TTCTCGACGC CCTGGGGTAC
GCCGTGGGGA GCGGGGCGGC CTGCTCCTCC GGCGGGCACA AGGCCTCGCC GGTGCTGCTC
GCGATGGGGC TCGGGGAGCG CGAGGCGTTC TCCTCGGTGA GGATCACGGT GGGCAAGGAC
AACACCTTCG AGGAGGTCGA CGGCTTTCTC ACGGCCTTCC GGCAGGCCGT CGGCCGCCTG
CGCGAGCTCT CCCCACTGCA GGCGGGTTGA
|
|---|
| Protein sequence | MTAEKSAVYL DNAATTPLDG RVLEAMLESL EGLRGNPSAL HAPGAAAREA VEEAREAVAA
LVGASPEEIV FTSGGTEADN LAVLGLARAA PPGRRHAVIS RVEHPAVREA GRRLEAEGFE
VTWLGVDGDG VVDAGAFEAA LREDTALAAV MWANNEVGSV QPVEELAAAC AERGIPFHAD
AVQAAGRLPV DVRRVPVSTL ALSAHKLYGP QGAGALYVRE GVEVSPLILG GGQERGLRSG
TENVAAISGF GVAARLAAGE LEERARRERE LRDRILAGVR EMEGVRLNGH PRRRLPNNVH
LTVEGVEAEG LVLFLDALGY AVGSGAACSS GGHKASPVLL AMGLGEREAF SSVRITVGKD
NTFEEVDGFL TAFRQAVGRL RELSPLQAG
|
|---|
| |