Gene Rxyl_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1320 
Symbol 
ID4115987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1348445 
End bp1349056 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content72% 
IMG OID638036114 
ProductTetR family transcriptional regulator 
Protein accessionYP_644096 
Protein GI108804159 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.010897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCATGG ATACTGCACC GTCCGGACGG TATAGTAGCA ACGTGGAGGG ATCGTCCGAC 
ACCCGGAGGA GGCTTCTGCT GGCGGCCGAG CGTCTGGCCG GGCGGGAGGG GGTGGCGCGT 
CTCACGCTGG AGGCGGTGGC GGCCGAGGCC GGGGTGAGCA AGGGCGGGCT ACTCTACCAC 
TTCTCTGGCA AGGAGGAGCT CATCGGGGCC ATGGTGATGC GTTGGGTCGA GGACTTCGAG 
CGCGACGTCG AGAGCAGGCT GGCGCGGGAG GGCTCACGGG CCGGGCGGTG GGTGCGGGCC 
TACGTGGGGG CGACCTTCGA GCCCGAGGCG GGCAGCGGCC CGGCGGCGGG AGAGCCCGTG 
AGCGTCCTGG CGGCCGCCGC TACGAACCGG GAGCTGCTCG GAGAGTTGAG GAGGTGCTAC 
CGGAAGTGGC AGGAGAGAAT GGAGGACGAC GGTCTGGACC CGGCGCTGGC GACCCTCCTC 
CGGCTCGCCG CCGACGGTCT GTGGTTCTCG GAGCTCTTCG GGCTCGCGCC CCCCTCCGGG 
CGGCTGCGCG AACGGGTGCA CCGCCGGATG CTCGAGCTCG CCTCCGGCGG CTGCGGGGGG 
CGCAAGCCGT GA
 
Protein sequence
MAMDTAPSGR YSSNVEGSSD TRRRLLLAAE RLAGREGVAR LTLEAVAAEA GVSKGGLLYH 
FSGKEELIGA MVMRWVEDFE RDVESRLARE GSRAGRWVRA YVGATFEPEA GSGPAAGEPV 
SVLAAAATNR ELLGELRRCY RKWQERMEDD GLDPALATLL RLAADGLWFS ELFGLAPPSG 
RLRERVHRRM LELASGGCGG RKP