| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1297 |
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| Symbol | |
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| ID | 4116960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1321391 |
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| End bp | 1322401 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638036085 |
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| Product | isocitrate dehydrogenase (NAD+) |
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| Protein accession | YP_644073 |
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| Protein GI | 108804136 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAGGA CCGTTACCCT CATACCCGGA GACGGAATAG GGCCGGAGGT CACTGGCTCG
GCGAAGGAGG TCATCGGCGC GCTCGGCGTG GACATCGAGT GGGAGATAGC CGAGGCCGGC
GAGACGGTGA TGGAGAGGGA GGGGACGCCC CTCCCCGAGT ACGTGCTGGA GTCCATCCGG
CGCAACAAGG TGGCCCTGAA GGGCCCGCTG ACCACCCCCG TGGGCACCGG CTTCCGCTCG
GTGAACGTGG CCCTGCGCAA GGAGCTCGAC CTCTACGCCA ACATCCGCCC GGCGCTCAGC
CTCCCGGGGC TCGACCTGCC GTACAGGGAC ATAGACATCC TGCTTTTCCG GGAGAACACC
GAGGATCTGT ACGCGGGCGT CGAGCACATG GTCGGCAAGC ACGCCGCCGA GTCCATCAAG
ATCATCACCC GCGAGGGCAC CGAGCGCATC TGCCGCATGG CCTTCGAGTA CTCGCGGGAC
CAGGGCCGCA GGCACGTCAC GGTGGTGCAC AAGGCCAACA TCATGAAGTA CACCGACGGC
CTCTTCCGGG AGGTCTTCTA CGAGGTCGCC AGAGACTACG AGGACGACTT CGAGGAGATC
GACGAGCGCA TCGTGGACAA CATGGCGATG CAGCTGGTGA TGAAGCCGAA CCTCTACGAC
GTTCTGGTCT GCCCCAACCT CTACGGGGAC ATCCTCTCGG ACCTGTGCGC CGGGCTGACC
GGCGGGCTCG GGGTCGCCCC GGGGGCGAAC ATCGGGGAGG ACATCGCGCT GTTCGAGCCG
GTGCACGGCT CGGCCCCCAA GTACGCCGGG CAGAACCGGG CCAACCCCTT GGCGACCCTG
CTGTCGGCGA AGAACATGCT CTACTACCTG GGGTACGGCG AGGCCGCCGA CCGCATGCAG
GGGGCCATCA ACGCCGCCCT GAAGAACCCC GAAACCCGGA CGAAGGACCT CGGCGGCAGC
GCCGGGACGC GGGAGTTCAC CCGGGCGGTG ATCTCCAACC TGACGGGCTA G
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| Protein sequence | MARTVTLIPG DGIGPEVTGS AKEVIGALGV DIEWEIAEAG ETVMEREGTP LPEYVLESIR
RNKVALKGPL TTPVGTGFRS VNVALRKELD LYANIRPALS LPGLDLPYRD IDILLFRENT
EDLYAGVEHM VGKHAAESIK IITREGTERI CRMAFEYSRD QGRRHVTVVH KANIMKYTDG
LFREVFYEVA RDYEDDFEEI DERIVDNMAM QLVMKPNLYD VLVCPNLYGD ILSDLCAGLT
GGLGVAPGAN IGEDIALFEP VHGSAPKYAG QNRANPLATL LSAKNMLYYL GYGEAADRMQ
GAINAALKNP ETRTKDLGGS AGTREFTRAV ISNLTG
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