Gene Rxyl_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1265 
Symbol 
ID4116423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1285914 
End bp1286525 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content74% 
IMG OID638036053 
ProductXRE family transcriptional regulator 
Protein accessionYP_644041 
Protein GI108804104 
COG category[K] Transcription
[S] Function unknown 
COG ID[COG1396] Predicted transcriptional regulators
[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.509144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAAG GGAGCGCAAG AGGGGCCGGC GAGGATGCTG TCCGGCGGGT CGGGGAGCGG 
GTGCGGATGC TCCGGCGGGA GCGGGGGCTC ACGCTGGAGG GGCTTGCCGG GCGGAGCGGG 
GTCAGCCGCG CCATGATCTC CAAGGTCGAG CGGGGGGAGA AGGTGCCCAC GCTGGTGGTG 
GCGGCCCGGC TGGCCGAGGG CCTGGGGGTG AGCCTCTCGG AGCTGGCCGG GGAGCGCGAG 
CGCCGGCGGG TGGTCGTCGT CCGGCGGGAG GAGCGGATGA CGATGCGCGA CCCGAGGACC 
GGCTTCGAGC GCCAGCTGCT CTCTCCCGGC TTTGGCGGGC GGGGGGTGGA GTTCATACGC 
AACGTGATCC CCGAGGGTTC GACCTCCGGA GAGTTCCCGC CCCACCGTCC CGGAGTGGAG 
GAGTACCTGG TCGTGGAGCG GGGGAGGCTG CTGGCGGTGC TCGGGGGTGC TGAGCACCTC 
CTGGGGGAGG GAGACGCCCT CTACTTCGCC GCGGACGTGC CCCACCGCTT CGACAACGCC 
GGGGAGGGGG AGTGCAGCTA CTACCTCGTC ATCGACTCCC GCGGGGCTCA GGCGGCCGGG 
CGCGAGCCGT AG
 
Protein sequence
MGEGSARGAG EDAVRRVGER VRMLRRERGL TLEGLAGRSG VSRAMISKVE RGEKVPTLVV 
AARLAEGLGV SLSELAGERE RRRVVVVRRE ERMTMRDPRT GFERQLLSPG FGGRGVEFIR 
NVIPEGSTSG EFPPHRPGVE EYLVVERGRL LAVLGGAEHL LGEGDALYFA ADVPHRFDNA 
GEGECSYYLV IDSRGAQAAG REP