| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1227 |
|---|
| Symbol | |
|---|
| ID | 4116288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1246957 |
|---|
| End bp | 1249401 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638036016 |
|---|
| Product | MMPL |
|---|
| Protein accession | YP_644004 |
|---|
| Protein GI | 108804067 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTCT TCTACCGCCT GGGGCGCTTT GACTACCGCT GGCGCTGGGC GCTGCTCGCC
GTGTGGGGTC TGCTCGTCGC CACCGGGGCC TTCTTCGCGC CGCGCATCGG CGGGGAGCTC
GAGGGCGGCG GCTTCGACGG GGCGGGGACC GAGGCCGAGC GGGTGCAGGA CATCATGGTC
GAGGAGTTCG GCGTCTCGCC GGCGACCCTC ACCGTGGTCT TCGACGGCGG GGGGCTGGAC
GCCCGCAGCG AGGAGTTCCG CCGGGCGGAG CGGGAGGCCC TGGAGCCGCT GCGGGAGATG
GAGGAGGTCC GCCACGTCTC CACCTACGCC AGCACCGGGG ACCCGCGCTT CGTCTCCGAG
GACGGCGGGG AGACGTACGC GGTGGTGGCC TTCGATGCCT CCATAGACAG GACGCAGGAT
CTGGTGGAGG AGGTGCGCCG GAAGGTCCGC TCCGACAGGC TCGAGACCTA CGTGACCGGG
GCCCCGGCGG TCTACCAGGA CATACAGGTC GCCAGCAACG AGGATATCCG GAAGGCCGAG
AAGTACGCCT TCCCGCTGGC GGTGCTCATC CTGATCTTCG CCTTCGGCAC GGTGGTCGCC
GCCGGCGTGC CGGTGCTCAT CGGCGGGGCG AGCGTGCTCT CCACCTTCGC GGTGCTGTAC
TTCGTGGCCG GCTCCTACGA CATGTCCATC TTCGTGCTGA CCATCTCCAC GATGCTGGGG
CTGGGGCTGG GGATAGACTA CGCCCTCTTC GCGGTGAGCC GCTTCCGGGA GGAGCTCGAG
GACTACCCGG TGGAGGAGGC GATCCCGCGG ACGGTGGCCA CGGCGGGGCG TTCGATCTTT
TTCTCGGGGA TGGCGGTCCT GATCGGGCTC TCCGGGCTGA TGTTCTTCCC GTTTATGTTC
ATGCGCTCCA TCGGGGCGGG CGGGGCGATC GTGGTGTTTG TCTCGGTGGC GGCGGCGCTG
ACGCTGCTGC CGGCCTTCCT GGGCGTGCTG GGGCACCGGG TGAACGCCCT CTCGATCCGG
CGGCACCGGG GGGCTCCGGG GACCCGCTTC TGGAGCCGGA GCGCGGAGCT GGTGATGCGC
CGGCCGGTCG CGGTGATCCT GGCGGTGGGC GCGGTGCTGG GGGCGCTGCT GTACCCGGCG
CTGCACATGA AGCTGGCGGT CCCGGAGGCG AGCGTGCTGC CGAGGAAGTA CGAGTCGCGT
GCCGGCGACG ACATCCTGAA GCGGGAGTTC GACTACCAGG CCCTGAACCC GATCCAGGTG
GTGGCCACCC TCTCCCACGA CCCGCTGAGC CCGGCCGGGC TGGCCGGGGT GAAGGAGCTG
GGGGAGCGGC TCCGAGCGAC GGGGGAGGTC AGGGAGCTCA CGAGCGTCTA CACGGTCGGG
GAGCGGGCGG CGCTGCAGTA CGCCCGGCGC GTGGAGGAGG CGCGGGAGCG CGCCCGCGCG
CGGGCCGAGC GCCGGGTGGA GGAGGCGGTG GAGGAGCAGC TCGCCGGGCT GCGGGCGCGG
CTGGGCTTTG TGCCACCGGG GGCGGAGGAG AGGATAAGGG AGGAGGCGCA GAGGAGGGCG
GAGGCCGAGC TCGAACGCCG GGTGCCGGAG CTGCCCGAGG GGGTCACCCC GGAGAGGGTC
ACCCCGGAGG GGGTGGCGAA CTTCCTGAGC CTCCCCGCGG CGCGGGACTC CGAACGCCTC
CGGCAGGCGG TGGACTCCTA CGTGGCCGGG GACCGGGCGC TCATCCAGGT GGTGGGCAGG
GACAACCCCT ACTCGGAGAG GGCCTACGCG GCGGTCGAGG AGATCCGCTC GGTCGAGCCC
CCGCAGGGGA CGAGCTTCCT CGTCGGCGGG CTCTCCGCCG GCCAGCGGGA CTTTATAGCG
AGCCTCTACG GCAAGGCCCC CTACGTGGTG GGCTTCGTCC TCGGCGTGAC CTACCTGATC
CTGCTGTTCA CCTTCCGCTC GGTGTTCATC CCGCTCAAGG CGGTCGTGGT GAACATCCTG
AGCCTCACGG CGAGCTTCGG GGCGATGGTC TTCGTCTTCC AGGACGGGCA CCTCTCGGGC
CTGCTGAACT TCACCCCCCT GGGCTTCGTG GACGCCACCC TGCCCATCCT GATGTTCTGC
ACCATCTTCG GCGTCTCGAT GGACTACGAG GTTTTCCTGC TCTCCAGGAT CCGGGAGGCC
TACGAGAACG GCGACTCGAA CACGGCGAGC GTGGCGAAGG GGCTCACCTC CACGGCGGGG
ATCATCACCT CGGCGGCGGC GATCATCATA GCGGTTACCG GCGCGTTCGC CTTCACCGGG
ATAGTGCTGA TCAAAGCCGT CGGCCTCGGG CTCGCCGTCG CCGTCTTCGT GGACGCCACC
ATCATCCGCG TGCTCCTGGT GCCGGCCACC ATGCGTATCC TGGGCGACTG GAACTGGTGG
CCCGGCGGGC GCAGGACCAC CTTCCACCCC GACGGCGGGG ATTGA
|
|---|
| Protein sequence | MRVFYRLGRF DYRWRWALLA VWGLLVATGA FFAPRIGGEL EGGGFDGAGT EAERVQDIMV
EEFGVSPATL TVVFDGGGLD ARSEEFRRAE REALEPLREM EEVRHVSTYA STGDPRFVSE
DGGETYAVVA FDASIDRTQD LVEEVRRKVR SDRLETYVTG APAVYQDIQV ASNEDIRKAE
KYAFPLAVLI LIFAFGTVVA AGVPVLIGGA SVLSTFAVLY FVAGSYDMSI FVLTISTMLG
LGLGIDYALF AVSRFREELE DYPVEEAIPR TVATAGRSIF FSGMAVLIGL SGLMFFPFMF
MRSIGAGGAI VVFVSVAAAL TLLPAFLGVL GHRVNALSIR RHRGAPGTRF WSRSAELVMR
RPVAVILAVG AVLGALLYPA LHMKLAVPEA SVLPRKYESR AGDDILKREF DYQALNPIQV
VATLSHDPLS PAGLAGVKEL GERLRATGEV RELTSVYTVG ERAALQYARR VEEARERARA
RAERRVEEAV EEQLAGLRAR LGFVPPGAEE RIREEAQRRA EAELERRVPE LPEGVTPERV
TPEGVANFLS LPAARDSERL RQAVDSYVAG DRALIQVVGR DNPYSERAYA AVEEIRSVEP
PQGTSFLVGG LSAGQRDFIA SLYGKAPYVV GFVLGVTYLI LLFTFRSVFI PLKAVVVNIL
SLTASFGAMV FVFQDGHLSG LLNFTPLGFV DATLPILMFC TIFGVSMDYE VFLLSRIREA
YENGDSNTAS VAKGLTSTAG IITSAAAIII AVTGAFAFTG IVLIKAVGLG LAVAVFVDAT
IIRVLLVPAT MRILGDWNWW PGGRRTTFHP DGGD
|
|---|
| |